RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 IFT46Q9NQC8 304 aa3.18□□□□□ -1.9
RNU6-55P-201ENST00000411092 PCDHB16Q9NRJ7 776 aa3.18□□□□□ -1.9
RNU6-55P-201ENST00000411092 SLC39A1Q9NY26 324 aa3.18□□□□□ -1.9
RNU6-55P-201ENST00000411092 KLHL13Q9P2N7 655 aa3.18□□□□□ -1.9
RNU6-55P-201ENST00000411092 MBD2Q9UBB5 411 aa3.18□□□□□ -1.9
RNU6-55P-201ENST00000411092 MTFP1Q9UDX5 166 aa3.18□□□□□ -1.9
RNU6-55P-201ENST00000411092 CHRNA9Q9UGM1 479 aa3.18□□□□□ -1.9
RNU6-55P-201ENST00000411092 NDRG3Q9UGV2 375 aa3.18□□□□□ -1.9
RNU6-55P-201ENST00000411092 ATPIF1Q9UII2 106 aa3.18□□□□□ -1.9
RNU6-55P-201ENST00000411092 PPIEQ9UNP9 301 aaKnown RBP3.18□□□□□ -1.9
RNU6-55P-201ENST00000411092 FOXJ3Q9UPW0 622 aa3.18□□□□□ -1.9
RNU6-55P-201ENST00000411092 PLEKHA6Q9Y2H5 1048 aa3.18□□□□□ -1.9
RNU6-55P-201ENST00000411092 ZNF337Q9Y3M9 751 aa3.18□□□□□ -1.9
RNU6-55P-201ENST00000411092 TMEM14AQ9Y6G1 99 aa3.18□□□□□ -1.9
RNU6-55P-201ENST00000411092 COLEC10Q9Y6Z7 277 aa3.18□□□□□ -1.9
RNU6-55P-201ENST00000411092 TRPM6Q9BX84 2022 aa3.18□□□□□ -1.9
RNU6-55P-201ENST00000411092 TP53BP1Q12888 1972 aaPredicted RBP3.18□□□□□ -1.9
RNU6-55P-201ENST00000411092 SNRNP200O75643 2136 aaKnown RBP3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 TICRRQ7Z2Z1 1910 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 TBC1D3IA0A087WXS9 549 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 TRBV5-7A0A0A0MS05 114 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 TRBV5-5A0A0J9YX44 114 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 A0A1B0GWA3 101 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 KANTRA0A1W2PQU2 76 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 GGT3PA6NGU5 568 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 GLOD5A6NK44 160 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 ANXA2P2A6NMY6 339 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 ARPC5O15511 151 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 TNFSF14O43557 240 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 FRS3O43559 492 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 NUDT21O43809 227 aaKnown RBP3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 LCMT2O60294 686 aaKnown RBP3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 CDC40O60508 579 aaKnown RBP eCLIP3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 SELENOFO60613 162 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 FCMRO60667 390 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 RAD1O60671 282 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 SRPX2O60687 465 aaPredicted RBP3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 ZNF254O75437 659 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 RDH16O75452 317 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 SCO1O75880 301 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 SCGNO76038 276 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 TOXO94900 526 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 GLCEO94923 617 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 KAT7O95251 611 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 PPP1R3DO95685 299 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 TXNDC12O95881 172 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 HPP00738 406 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 ANXA2P07355 339 aaKnown RBP3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 HOXC4P09017 264 aaPredicted RBP3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 ANKRD34CP0C6C1 535 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 GKN3PP0CG01 181 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 PNMTP11086 282 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 SLC25A4P12235 298 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 IL9P15248 144 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 HLA-GP17693 338 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 TBPP20226 339 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 CDK2P24941 298 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 MPZP25189 248 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 PSMB5P28074 263 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 RAD52P43351 418 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 HOXA1P49639 335 aaPredicted RBP3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 CCL23P55773 120 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 MAZP56270 477 aaKnown RBP3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 TAS2R19P59542 299 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 TAS2R20P59543 309 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 RAB8AP61006 207 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 UBE2MP61081 183 aaKnown RBP3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 RPS4XP62701 263 aaKnown RBP3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 SKP1P63208 163 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 MAT1AQ00266 395 aaKnown RBP3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 TLE2Q04725 743 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 SCRN3Q0VDG4 424 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 BTN1A1Q13410 526 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 MADCAM1Q13477 382 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 CBFBQ13951 182 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 MEF2DQ14814 521 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 TEAD2Q15562 447 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 ZNHIT3Q15649 155 aaPredicted RBP3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 ZNF141Q15928 474 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 RPE65Q16518 533 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 DUSP5Q16690 384 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 TCTN1Q2MV58 587 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 LINC00303Q3SY05 128 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 VWA2Q5GFL6 755 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 PABPC1L2AQ5JQF8 200 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 ZNF684Q5T5D7 378 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 FAM27D1Q5T7N8 215 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 C18orf63Q68DL7 685 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 ZNF660Q6AZW8 331 aaPredicted RBP3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 AWAT2Q6E213 333 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 FAM180BQ6P0A1 224 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 TSSK4Q6SA08 328 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 ENPP7Q6UWV6 458 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 B3GLCTQ6Y288 498 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 STAC2Q6ZMT1 411 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 Q6ZTK2 550 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 MOB3CQ70IA8 216 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 NDUFAF7Q7L592 441 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 SLC16A9Q7RTY1 509 aa3.17□□□□□ -1.9
RNU6-55P-201ENST00000411092 SLC36A1Q7Z2H8 476 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms