RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 MCUR1Q96AQ8 359 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 PYURFQ96I23 114 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 COG8Q96MW5 612 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 DIRC2Q96SL1 478 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 GPX7Q96SL4 187 aaPredicted RBP12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 OR2H1Q9GZK4 316 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 TPK1Q9H3S4 243 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 NRIP3Q9NQ35 241 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 AURKCQ9UQB9 309 aa12.45□□□□□ -0.42
NIF3L1-205ENST00000409588 PRSS37A4D1T9 235 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 C5orf49A4QMS7 147 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 B4DSR2 109 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 CDC42EP2O14613 210 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 CCL2P13500 99 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 ANPEPP15144 967 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 NCK1P16333 377 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 CCNOP22674 350 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 SDHAP31040 664 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 IFNGR2P38484 337 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 GPR6P46095 362 aaPredicted RBP12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 RPS6KA3P51812 740 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 LSM6P62312 80 aaKnown RBP12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 ERVK-25P63136 954 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 FMODQ06828 376 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 SCRN3Q0VDG4 424 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 ZMAT1Q5H9K5 638 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 MBNL2Q5VZF2 373 aaKnown RBP12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 C16orf89Q6UX73 402 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 TSEN54Q7Z6J9 526 aaKnown RBP12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 PIGWQ7Z7B1 504 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 PAQR4Q8N4S7 273 aaPredicted RBP12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 OR13C2Q8NGS9 318 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 TMEM158Q8WZ71 300 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 DHRS1Q96LJ7 313 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 FAM107BQ9H098 131 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 DECR2Q9NUI1 292 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 EGFL7Q9UHF1 273 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 TAGLN3Q9UI15 199 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 SIGLEC7Q9Y286 467 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 ATRQ13535 2644 aa12.44□□□□□ -0.42
NIF3L1-205ENST00000409588 IGKV1D-43A0A0B4J1Z2 117 aa12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 PLSCR5A0PG75 271 aa12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 J3QL48 77 aa12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 IMPA2O14732 288 aa12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 TFP02787 698 aa12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 HPXP02790 462 aa12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 NAT2P11245 290 aa12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 ZNF16P17020 682 aaPredicted RBP12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 COL8A2P25067 703 aa12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 CRYBB2P43320 205 aa12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 GPR4P46093 362 aa12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 OMPP47874 163 aa12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 FAM120AOSQ5T036 256 aa12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 PGM2L1Q6PCE3 622 aa12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 CXXC5Q7LFL8 322 aaKnown RBP12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 FAM122BQ7Z309 247 aa12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 MARS2Q96GW9 593 aaKnown RBP12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 ZNF570Q96NI8 536 aa12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 MDFIQ99750 246 aa12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 POLE4Q9NR33 117 aa12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 TBCCD1Q9NVR7 557 aa12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 MYEF2Q9P2K5 600 aaKnown RBP12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 CD300AQ9UGN4 299 aa12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 ZDHHC8Q9ULC8 765 aa12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 FZR1Q9UM11 496 aa12.43□□□□□ -0.42
NIF3L1-205ENST00000409588 LOC100509620A0A075B734 347 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 TEX13CA0A0J9YWL9 993 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 A0A1W2PPL8 197 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 J3QW42 95 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 KHDRBS3O75525 346 aaKnown RBP12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 KRT36O76013 467 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 TXNDC12O95881 172 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 CLPTM1O96005 669 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 ADH4P08319 380 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 SRD5A1P18405 259 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 TCN1P20061 433 aaPredicted RBP12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 FUT4P22083 530 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 CRABP1P29762 137 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 LIMS1P48059 325 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 DVL1P1P54792 670 aaPredicted RBP12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 FGD3Q5JSP0 725 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 DNM1P34Q6PK57 102 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 SMARCD3Q6STE5 483 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 IGFN1Q86VF2 1251 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 GLB1L2Q8IW92 636 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 ARHGAP24Q8N264 748 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 LINC00471Q8N535 108 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 TEX29Q8N6K0 151 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 FAM46AQ96IP4 442 aaKnown RBP12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 C4orf45Q96LM5 186 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 Q96M85 177 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 NSMCE2Q96MF7 247 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 SNX18Q96RF0 628 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 CDRT15Q96T59 188 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 EGLN1Q9GZT9 426 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 RACGAP1Q9H0H5 632 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 WNT5BQ9H1J7 359 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 IL1RAPQ9NPH3 570 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 VSX1Q9NZR4 365 aaPredicted RBP12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 ATPIF1Q9UII2 106 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms