RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 RBMS2Q15434 407 aaKnown RBP7.53□□□□□ -1.2
SNX13-201ENST00000409076 ZNF425Q6IV72 752 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 GLDNQ6ZMI3 551 aaPredicted RBP7.53□□□□□ -1.2
SNX13-201ENST00000409076 FAM181AQ8N9Y4 354 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 MARCH1Q8TCQ1 289 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 PPP1R1CQ8WVI7 109 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 NPAS1Q99742 590 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 SOX7Q9BT81 388 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 TMPRSS13Q9BYE2 586 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 RTN4RQ9BZR6 473 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 HEXA-AS1Q9H8Q6 139 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 STEAP1Q9UHE8 339 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 COL6A3P12111 3177 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 A0A0J9YY10 115 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 SLC22A23A1A5C7 686 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 HSPB6O14558 160 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 KCNJ13O60928 360 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 CRTAPO75718 401 aaPredicted RBP7.53□□□□□ -1.2
SNX13-201ENST00000409076 EIF3GO75821 320 aaKnown RBP eCLIP7.53□□□□□ -1.2
SNX13-201ENST00000409076 CD14P08571 375 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 CTLA4P16410 223 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 PVALBP20472 110 aaPredicted RBP7.53□□□□□ -1.2
SNX13-201ENST00000409076 HSD11B1P28845 292 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 RIDAP52758 137 aaKnown RBP7.53□□□□□ -1.2
SNX13-201ENST00000409076 RPS11P62280 158 aaKnown RBP eCLIP7.53□□□□□ -1.2
SNX13-201ENST00000409076 FOXK1P85037 733 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 AIMP2Q13155 320 aaKnown RBP7.53□□□□□ -1.2
SNX13-201ENST00000409076 PRTGQ2VWP7 1150 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 C9orf135Q5VTT2 229 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 TMEM71Q6P5X7 295 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 RNF144BQ7Z419 303 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 ABHD12BQ7Z5M8 362 aaPredicted RBP7.53□□□□□ -1.2
SNX13-201ENST00000409076 C20orf196Q8IYI0 205 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 SAMD14Q8IZD0 417 aaPredicted RBP7.53□□□□□ -1.2
SNX13-201ENST00000409076 GABRG1Q8N1C3 465 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 TOR1AIP2Q8NFQ8 470 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 ANKRD9Q96BM1 317 aaPredicted RBP7.53□□□□□ -1.2
SNX13-201ENST00000409076 ZNF524Q96C55 264 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 MRGPRX1Q96LB2 322 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 KLHL15Q96M94 604 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 TSPAN32Q96QS1 320 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 KLHL13Q9P2N7 655 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 TMED7Q9Y3B3 224 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 TMEM184BQ9Y519 407 aaPredicted RBP7.53□□□□□ -1.2
SNX13-201ENST00000409076 IGHV3-15A0A0B4J1V0 119 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 RPS10-NUDT3A0A1W2PQS6 291 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 NMBP08949 121 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 OR4E1P0C645 316 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 ABOP16442 354 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 ZNF20P17024 532 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 HRH1P35367 487 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 OR3A2P47893 321 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 RPS4XP62701 263 aaKnown RBP7.53□□□□□ -1.2
SNX13-201ENST00000409076 PLAURQ03405 335 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 CCINQ13939 588 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 C14orf28Q4W4Y0 310 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 MESTQ5EB52 335 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 KLHL24Q6TFL4 600 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 SLC29A4Q7RTT9 530 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 ESX1Q8N693 406 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 BPIFCQ8NFQ6 507 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 OR1S2Q8NGQ3 325 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 NUBPLQ8TB37 319 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 OR51B6Q9H340 312 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 RALGAPA1Q6GYQ0 2036 aa7.53□□□□□ -1.2
SNX13-201ENST00000409076 GGT3PA6NGU5 568 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 H7C2Y5 167 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 ZNF264O43296 627 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 SSX5O60225 188 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 PRH1P02810 166 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 RAB6AP20340 208 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 SERPINA2P20848 420 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 GABRR1P24046 479 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 NFYBP25208 207 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 RAP2BP61225 183 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 EFNB1P98172 346 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 TAGLNQ01995 201 aaKnown RBP7.52□□□□□ -1.21
SNX13-201ENST00000409076 PMPCAQ10713 525 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 GAB4Q2WGN9 574 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 ZNF585AQ6P3V2 769 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 BAIAP2L2Q6UXY1 529 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 TMPRSS11FQ6ZWK6 438 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 SLC51BQ86UW2 128 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 GTPBP8Q8N3Z3 284 aaPredicted RBP7.52□□□□□ -1.21
SNX13-201ENST00000409076 ZSCAN1Q8NBB4 408 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 PXT1Q8NFP0 134 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 OR2I1PQ8NGU4 316 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 ZC3HAV1LQ96H79 300 aaKnown RBP7.52□□□□□ -1.21
SNX13-201ENST00000409076 SEMA6CQ9H3T2 930 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 PTGES2Q9H7Z7 377 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 DUSP22Q9NRW4 184 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 CA14Q9ULX7 337 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 EDARQ9UNE0 448 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 R4GN57 208 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 SHANK1Q9Y566 2161 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 OR5H14A6NHG9 310 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 TXNL1O43396 289 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 PRAMEF2O60811 474 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 PPM1BO75688 479 aa7.52□□□□□ -1.21
SNX13-201ENST00000409076 AHSA1O95433 338 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms