RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 ADPRMQ3LIE5 342 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 LHFPL2Q6ZUX7 228 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 GDF7Q7Z4P5 450 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 OR5AS1Q8N127 324 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 UBAC2Q8NBM4 344 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 TOX2Q96NM4 488 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 SAGE1Q9NXZ1 904 aa11.07□□□□□ -0.64
SMCR8-201ENST00000406438 ALOX12BO75342 701 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 ATXN1LP0C7T5 689 aaKnown RBP11.06□□□□□ -0.64
SMCR8-201ENST00000406438 FCER1GP30273 86 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 ZNF85Q03923 595 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 PMPCAQ10713 525 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 MYBPHQ13203 477 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 FAM111BQ6SJ93 734 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 MARCH3Q86UD3 253 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 CCDC71Q8IV32 467 aaPredicted RBP11.06□□□□□ -0.64
SMCR8-201ENST00000406438 MAML2Q8IZL2 1156 aaPredicted RBP11.06□□□□□ -0.64
SMCR8-201ENST00000406438 ZNF321PQ8N8H1 164 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 MS4A8Q9BY19 250 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 NDRG4Q9ULP0 352 aaKnown RBP11.06□□□□□ -0.64
SMCR8-201ENST00000406438 XRCC3O43542 346 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 CTNSO60931 367 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 EMC4Q5J8M3 183 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 OR52H1Q8NGJ2 320 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 OR2G3Q8NGZ4 309 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 RASD2Q96D21 266 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 SLC35D1Q9NTN3 355 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 SNX11Q9Y5W9 270 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 A0A1B0GWA3 101 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 SSSCA1O60232 199 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 S100A11P31949 105 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 HTR4Q13639 388 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 ELAVL1Q15717 326 aaKnown RBP11.06□□□□□ -0.64
SMCR8-201ENST00000406438 ELF4Q99607 663 aaPredicted RBP11.06□□□□□ -0.64
SMCR8-201ENST00000406438 KIR3DX1Q9H7L2 352 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 LIN7CQ9NUP9 197 aaKnown RBP11.06□□□□□ -0.64
SMCR8-201ENST00000406438 SELENOFO60613 162 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 IAH1Q2TAA2 248 aaPredicted RBP11.06□□□□□ -0.64
SMCR8-201ENST00000406438 C1orf140Q5VVS0 124 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 ADGRF3Q8IZF5 1079 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 LGI3Q8N145 548 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 CPPED1Q9BRF8 314 aaPredicted RBP11.06□□□□□ -0.64
SMCR8-201ENST00000406438 SYT5O00445 386 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 COX20Q5RI15 118 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 OR6M1Q8NGM8 313 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 PFN4Q8NHR9 129 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 ZNF576Q9H609 170 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 MOB1AQ9H8S9 216 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 PSORS1C1Q9UIG5 152 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 PMS2P1A4D2B8 440 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 TAS2R45P59539 299 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 C1orf87Q8N0U7 546 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 EMCNQ9ULC0 261 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 M0QZ24 198 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 SHC1P29353 583 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 ELLP55199 621 aaPredicted RBP11.06□□□□□ -0.64
SMCR8-201ENST00000406438 ZNF573Q86YE8 665 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 EGLN2Q96KS0 407 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 MED18Q9BUE0 208 aa11.06□□□□□ -0.64
SMCR8-201ENST00000406438 ACKR3P25106 362 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 SIAH3Q8IW03 269 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 PIGTQ969N2 578 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 TM4SF18Q96CE8 201 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 ZNF583Q96ND8 569 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 RNF32Q9H0A6 362 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 RYDENQ9NUL5 291 aaKnown RBP11.05□□□□□ -0.64
SMCR8-201ENST00000406438 CCL26Q9Y258 94 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 V9GYS6 101 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 KIAA2026Q5HYC2 2103 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 TM4SF4P48230 202 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 AVPI1Q5T686 147 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 OR2AE1Q8NHA4 323 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 CMTM3Q96MX0 182 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 CSF3RQ99062 836 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 AMBRA1Q9C0C7 1298 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 CACFD1Q9UGQ2 172 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 URGCP-MRPS24S4R325 110 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 CHD3Q12873 2000 aaKnown RBP11.05□□□□□ -0.64
SMCR8-201ENST00000406438 PAPLNO95428 1278 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 GLIPR1L1Q6UWM5 242 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 DOK3Q7L591 496 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 DVL3Q92997 716 aaPredicted RBP11.05□□□□□ -0.64
SMCR8-201ENST00000406438 CHST11Q9NPF2 352 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 PPP5D1E7EU14 171 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 SCO1O75880 301 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 RPA2P15927 270 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 DOC2BQ14184 412 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 NKAIN1Q4KMZ8 207 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 PRAMEF5Q5TYX0 476 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 PRAMEF6Q5VXH4 476 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 SLC48A1Q6P1K1 146 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 LILRA2Q8N149 483 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 KCNRGQ8N5I3 272 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 DOPEY2Q9Y3R5 2298 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 IGHV3-9P01782 118 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 RPL7L1Q6DKI1 246 aaKnown RBP11.05□□□□□ -0.64
SMCR8-201ENST00000406438 MFSD12Q6NUT3 480 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 PLXDC2Q6UX71 529 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 NLRC3Q7RTR2 1065 aa11.05□□□□□ -0.64
SMCR8-201ENST00000406438 KCNE4Q8WWG9 221 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms