RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 CDKN2AP42771 156 aaKnown RBP8.17□□□□□ -1.1
LIG4-202ENST00000405925 AGFG1P52594 562 aaKnown RBP8.17□□□□□ -1.1
LIG4-202ENST00000405925 FXNQ16595 210 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 FAM198BQ6UWH4 519 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 CD300LDQ6UXZ3 194 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 CENPSQ8N2Z9 138 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 PLPP7Q8NBV4 271 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 OR2M3Q8NG83 312 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 ADAMTS14Q8WXS8 1223 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 PIGTQ969N2 578 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 SLC6A7Q99884 636 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 MICU1Q9BPX6 476 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 WFDC6Q9BQY6 131 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 GDF2Q9UK05 429 aaPredicted RBP8.17□□□□□ -1.1
LIG4-202ENST00000405925 NOP16Q9Y3C1 178 aaKnown RBP8.17□□□□□ -1.1
LIG4-202ENST00000405925 RHBDD3Q9Y3P4 386 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 TIMM10BQ9Y5J6 103 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 ICE1Q9Y2F5 2266 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 TICRRQ7Z2Z1 1910 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 MEIS3P1A6NDR6 274 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 ZNF850A8MQ14 1090 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 TGFBR3LH3BV60 316 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 TIMM8AO60220 97 aaPredicted RBP8.17□□□□□ -1.1
LIG4-202ENST00000405925 GPANK1O95872 356 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 SPINK2P20155 84 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 PTGS2P35354 604 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 CXADRP78310 365 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 MGAT2Q10469 447 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 DBPQ10586 325 aaPredicted RBP8.17□□□□□ -1.1
LIG4-202ENST00000405925 NTRK2Q16620 822 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 ZNF684Q5T5D7 378 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 C3P1Q6ZMU1 363 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 OR13C5Q8NGS8 318 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 TXNDC15Q96J42 360 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 SCGB3A2Q96PL1 93 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 TSPAN32Q96QS1 320 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 SIGLEC11Q96RL6 698 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 FOXB1Q99853 325 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 CACNG6Q9BXT2 260 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 ISG20L2Q9H9L3 353 aaKnown RBP8.17□□□□□ -1.1
LIG4-202ENST00000405925 PLEKHJ1Q9NW61 149 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 LHX6Q9UPM6 363 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 IMPA2O14732 288 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 OR7C1O76099 320 aaPredicted RBP8.17□□□□□ -1.1
LIG4-202ENST00000405925 ZNF16P17020 682 aaPredicted RBP8.17□□□□□ -1.1
LIG4-202ENST00000405925 RAC3P60763 192 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 IGLV3-21P80748 117 aaPredicted RBP8.17□□□□□ -1.1
LIG4-202ENST00000405925 LTBQ06643 244 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 PCOLCEQ15113 449 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 FHL5Q5TD97 284 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 SFXN4Q6P4A7 337 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 LYPD4Q6UWN0 246 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 ZNF687Q8N1G0 1237 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 SYS1Q8N2H4 156 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 GTPBP8Q8N3Z3 284 aaPredicted RBP8.17□□□□□ -1.1
LIG4-202ENST00000405925 AKR7LQ8NHP1 331 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 OR51E1Q8TCB6 317 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 LIPHQ8WWY8 451 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 FOXRED1Q96CU9 486 aaPredicted RBP8.17□□□□□ -1.1
LIG4-202ENST00000405925 DCLRE1CQ96SD1 692 aaKnown RBP8.17□□□□□ -1.1
LIG4-202ENST00000405925 GPA33Q99795 319 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 MRI1Q9BV20 369 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 FGF20Q9NP95 211 aaPredicted RBP8.17□□□□□ -1.1
LIG4-202ENST00000405925 ABRACLQ9P1F3 81 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 KCNE5Q9UJ90 142 aa8.17□□□□□ -1.1
LIG4-202ENST00000405925 PMS2P1A4D2B8 440 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 PLPP3O14495 311 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 ZNF254O75437 659 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 IGKV3-11P04433 115 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 RAB40ALP0C0E4 278 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 LIFP15018 202 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 CTLA4P16410 223 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 ADH6P28332 368 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 ACTBP60709 375 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 ACTG1P63261 375 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 ARL6IP1Q15041 203 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 TBC1D28Q2M2D7 210 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 SFRP4Q6FHJ7 346 aaPredicted RBP8.16□□□□□ -1.1
LIG4-202ENST00000405925 MAMSTRQ6ZN01 415 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 GDPD1Q8N9F7 314 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 MINDY2Q8NBR6 621 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 ACBD4Q8NC06 268 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 LGALS14Q8TCE9 139 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 AKAP1Q92667 903 aaKnown RBP eCLIP8.16□□□□□ -1.1
LIG4-202ENST00000405925 ADIPOR1Q96A54 375 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 ZNF700Q9H0M5 742 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 SLCO5A1Q9H2Y9 848 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 SLCO1C1Q9NYB5 712 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 CCDC59Q9P031 241 aaKnown RBP8.16□□□□□ -1.1
LIG4-202ENST00000405925 NLKQ9UBE8 527 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 ZNF69Q9UC07 566 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 C14orf166Q9Y224 244 aaKnown RBP8.16□□□□□ -1.1
LIG4-202ENST00000405925 WNT11O96014 354 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 COX6A1P12074 109 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 CD59P13987 128 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 TNFSF4P23510 183 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 SHBQ15464 509 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 APOOLQ6UXV4 268 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 SYT9Q86SS6 491 aa8.16□□□□□ -1.1
LIG4-202ENST00000405925 C17orf82Q86X59 251 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms