RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 MMP9P14780 707 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 AQP1P29972 269 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 LIPAP38571 399 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 MDH2P40926 338 aaKnown RBP9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 GDI2P50395 445 aaKnown RBP9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 CLRN1P58418 232 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 CDK6Q00534 326 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 RUNDC3AQ59EK9 446 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 C6orf10Q5SRN2 563 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 CEP85LQ5SZL2 805 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ARMC4Q5T2S8 1044 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 SAMD5Q5TGI4 173 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 HHATQ5VTY9 493 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 SLC25A47Q6Q0C1 308 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 LYPD2Q6UXB3 125 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ZNF841Q6ZN19 808 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 Q6ZSV7 163 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 HIPK4Q8NE63 616 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 OR6T1Q8NGN1 323 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 TBX15Q96SF7 602 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 MCHR1Q99705 422 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 TMEM246Q9BRR3 403 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ZNF426Q9BUY5 554 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 OR2H1Q9GZK4 316 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 CACYBPQ9HB71 228 aaKnown RBP9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 GCM1Q9NP62 436 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 SLCO1B3Q9NPD5 702 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 NOX4Q9NPH5 578 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 THUMPD1Q9NXG2 353 aaKnown RBP9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ASH2LQ9UBL3 628 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 PPP1R3CQ9UQK1 317 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 BIRC6Q9NR09 4857 aa9.89□□□□□ -0.83
SPTLC1P3-201ENST00000403408 IGHV3-64DA0A0J9YX35 117 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 TNFRSF13BO14836 293 aaPredicted RBP9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 BIRC5O15392 142 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 TIMM8AO60220 97 aaPredicted RBP9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 FCN3O75636 299 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 OR6A2O95222 327 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 CRYBA1P05813 215 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ACADSP16219 412 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 RPL18Q07020 188 aaKnown RBP9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 FADDQ13158 208 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 SGCAQ16586 387 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 DUSP7Q16829 419 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 GCNT6Q5T4J0 391 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 SWT1Q5T5J6 900 aaKnown RBP9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 REEP3Q6NUK4 255 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ZNF620Q6ZNG0 422 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 MSANTD1Q6ZTZ1 278 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 RANBP3LQ86VV4 465 aaPredicted RBP9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 TMEM86BQ8N661 226 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 SMYD1Q8NB12 490 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 MOSPD2Q8NHP6 518 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 NSMAFQ92636 917 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ZBTB9Q96C00 473 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 MAELQ96JY0 434 aaKnown RBP9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 C4orf45Q96LM5 186 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 OR2V2Q96R30 315 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 OR52B2Q96RD2 323 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 PRSS27Q9BQR3 290 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 NUDT16L1Q9BRJ7 211 aaKnown RBP9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 TCF7L1Q9HCS4 588 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 NANSQ9NR45 359 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 SDR39U1Q9NRG7 319 aaPredicted RBP9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ZIM2Q9NZV7 527 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 EIF3KQ9UBQ5 218 aaKnown RBP9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 STARD10Q9Y365 291 aa9.88□□□□□ -0.83
SPTLC1P3-201ENST00000403408 TRBV5-3A0A0A0MS03 114 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 CENPVL3A0A0U1RRI6 287 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 TMEM247A6NEH6 219 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 CPSF4LA6NMK7 179 aaKnown RBP9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 C5orf58C9J3I9 102 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 H3BSA7 217 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 PIN1P1O15428 100 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 CHP2O43745 196 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ENTPD5O75356 428 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 RPS2P15880 293 aaKnown RBP9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 KITLGP21583 273 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 LAP3P28838 519 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 AQP2P41181 271 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ZNF84P51523 738 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 POLR2JP52435 117 aaKnown RBP9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 GNB2P62879 340 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 STX3Q13277 289 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ENDOGQ14249 297 aaKnown RBP9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ENTPD8Q5MY95 495 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 FAM27BQ5VT28 67 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 FAM205BPQ63HN1 556 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 SLC27A4Q6P1M0 643 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ZNF613Q6PF04 617 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 BTNL3Q6UXE8 466 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 FUNDC1Q8IVP5 155 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 ZSCAN4Q8NAM6 433 aaPredicted RBP9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 C19orf18Q8NEA5 215 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 CMBLQ96DG6 245 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 CCNB1IP1Q9NPC3 277 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 SELENONQ9NZV5 590 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 VAPAQ9P0L0 249 aa9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.87□□□□□ -0.83
SPTLC1P3-201ENST00000403408 CGGBP1Q9UFW8 167 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms