RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 OR8S1Q8NH09 359 aa17.86■□□□□ 0.45
CCDC47-202ENST00000403162 ASB17Q8WXJ9 295 aa17.86■□□□□ 0.45
CCDC47-202ENST00000403162 DVL3Q92997 716 aaPredicted RBP17.86■□□□□ 0.45
CCDC47-202ENST00000403162 TAAR8Q969N4 342 aa17.86■□□□□ 0.45
CCDC47-202ENST00000403162 SLC25A21Q9BQT8 299 aaPredicted RBP17.86■□□□□ 0.45
CCDC47-202ENST00000403162 ATG5Q9H1Y0 275 aa17.86■□□□□ 0.45
CCDC47-202ENST00000403162 FBXL2Q9UKC9 423 aa17.86■□□□□ 0.45
CCDC47-202ENST00000403162 PILRBQ9UKJ0 227 aa17.86■□□□□ 0.45
CCDC47-202ENST00000403162 KNL1Q8NG31 2342 aa17.85■□□□□ 0.45
CCDC47-202ENST00000403162 A0A1B0GW55 424 aa17.85■□□□□ 0.45
CCDC47-202ENST00000403162 SCDO00767 359 aa17.85■□□□□ 0.45
CCDC47-202ENST00000403162 SPDEFO95238 335 aa17.85■□□□□ 0.45
CCDC47-202ENST00000403162 GPANK1O95872 356 aa17.85■□□□□ 0.45
CCDC47-202ENST00000403162 DUX4L2P0CJ85 424 aa17.85■□□□□ 0.45
CCDC47-202ENST00000403162 DUX4L3P0CJ86 424 aa17.85■□□□□ 0.45
CCDC47-202ENST00000403162 DUX4L4P0CJ87 422 aa17.85■□□□□ 0.45
CCDC47-202ENST00000403162 DUX4L5P0CJ88 424 aa17.85■□□□□ 0.45
CCDC47-202ENST00000403162 DUX4L6P0CJ89 424 aa17.85■□□□□ 0.45
CCDC47-202ENST00000403162 DUX4L7P0CJ90 424 aa17.85■□□□□ 0.45
CCDC47-202ENST00000403162 AGTR1P30556 359 aa17.85■□□□□ 0.45
CCDC47-202ENST00000403162 ARHGAP40Q5TG30 622 aa17.85■□□□□ 0.45
CCDC47-202ENST00000403162 ASPHD2Q6ICH7 369 aa17.85■□□□□ 0.45
CCDC47-202ENST00000403162 ARMC6Q6NXE6 501 aa17.85■□□□□ 0.45
CCDC47-202ENST00000403162 PM20D2Q8IYS1 436 aa17.85■□□□□ 0.45
CCDC47-202ENST00000403162 C12orf45Q8N5I9 185 aaPredicted RBP17.85■□□□□ 0.45
CCDC47-202ENST00000403162 LMX1AQ8TE12 382 aa17.85■□□□□ 0.45
CCDC47-202ENST00000403162 SLC25A28Q96A46 364 aa17.85■□□□□ 0.45
CCDC47-202ENST00000403162 MRPS24Q96EL2 167 aaKnown RBP17.85■□□□□ 0.45
CCDC47-202ENST00000403162 ZC3H10Q96K80 434 aaKnown RBP17.85■□□□□ 0.45
CCDC47-202ENST00000403162 ELOVL3Q9HB03 270 aa17.85■□□□□ 0.45
CCDC47-202ENST00000403162 DUX4Q9UBX2 424 aa17.85■□□□□ 0.45
CCDC47-202ENST00000403162 TMEM82A0PJX8 343 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 OR2W5A6NFC9 320 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 IL33O95760 270 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 CD8AP01732 235 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 GALNSP34059 522 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 TEX30Q5JUR7 227 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 AVL9Q8NBF6 648 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 RNF128Q8TEB7 428 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 ATOH1Q92858 354 aaPredicted RBP17.84■□□□□ 0.45
CCDC47-202ENST00000403162 ZNF524Q96C55 264 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 SEH1LQ96EE3 360 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 ADAM19Q9H013 955 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 DNTTIP1Q9H147 329 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 SCPEP1Q9HB40 452 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 SUSD2Q9UGT4 822 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 TDRD6O60522 2096 aaKnown RBP17.84■□□□□ 0.45
CCDC47-202ENST00000403162 A0A0D9SG52 128 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 NSA2O95478 260 aaKnown RBP17.84■□□□□ 0.45
CCDC47-202ENST00000403162 RAB3DO95716 219 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 FBXO45P0C2W1 286 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 TACR3P29371 465 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 HSD17B7P56937 341 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 ELOCQ15369 112 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 MEP1BQ16820 701 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 CLVS2Q5SYC1 327 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 CFAP77Q6ZQR2 320 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 ZNF679Q8IYX0 411 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 PXT1Q8NFP0 134 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 OR1J4Q8NGS1 313 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 STK35Q8TDR2 534 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 PELOQ9BRX2 385 aaKnown RBP17.84■□□□□ 0.45
CCDC47-202ENST00000403162 USP34Q70CQ2 3546 aa17.84■□□□□ 0.45
CCDC47-202ENST00000403162 TEX46H3BTG2 121 aa17.83■□□□□ 0.45
CCDC47-202ENST00000403162 HNRNPKP61978 463 aaKnown RBP eCLIP17.83■□□□□ 0.45
CCDC47-202ENST00000403162 SRSF4Q08170 494 aaKnown RBP17.83■□□□□ 0.45
CCDC47-202ENST00000403162 TMEM205Q6UW68 189 aa17.83■□□□□ 0.45
CCDC47-202ENST00000403162 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.83■□□□□ 0.45
CCDC47-202ENST00000403162 ESX1Q8N693 406 aa17.83■□□□□ 0.45
CCDC47-202ENST00000403162 ST8SIA2Q92186 375 aa17.83■□□□□ 0.45
CCDC47-202ENST00000403162 B3GNT4Q9C0J1 378 aa17.83■□□□□ 0.45
CCDC47-202ENST00000403162 SLCO5A1Q9H2Y9 848 aa17.83■□□□□ 0.45
CCDC47-202ENST00000403162 ZNF107Q9UII5 783 aaPredicted RBP17.83■□□□□ 0.45
CCDC47-202ENST00000403162 GMEB2Q9UKD1 530 aa17.83■□□□□ 0.45
CCDC47-202ENST00000403162 EIF4E2O60573 245 aaKnown RBP17.83■□□□□ 0.44
CCDC47-202ENST00000403162 UTS2O95399 124 aa17.83■□□□□ 0.44
CCDC47-202ENST00000403162 CD37P11049 281 aa17.83■□□□□ 0.44
CCDC47-202ENST00000403162 FGL1Q08830 312 aa17.83■□□□□ 0.44
CCDC47-202ENST00000403162 LPAL2Q16609 132 aa17.83■□□□□ 0.44
CCDC47-202ENST00000403162 GLT8D1Q68CQ7 371 aa17.83■□□□□ 0.44
CCDC47-202ENST00000403162 TMEM225Q6GV28 225 aa17.83■□□□□ 0.44
CCDC47-202ENST00000403162 ZNF546Q86UE3 836 aa17.83■□□□□ 0.44
CCDC47-202ENST00000403162 ELF4Q99607 663 aaPredicted RBP17.83■□□□□ 0.44
CCDC47-202ENST00000403162 RASL12Q9NYN1 266 aa17.83■□□□□ 0.44
CCDC47-202ENST00000403162 A0A1B0GTI1 187 aa17.82■□□□□ 0.44
CCDC47-202ENST00000403162 DOK2O60496 412 aa17.82■□□□□ 0.44
CCDC47-202ENST00000403162 BGLAPP02818 100 aa17.82■□□□□ 0.44
CCDC47-202ENST00000403162 FSTP19883 344 aa17.82■□□□□ 0.44
CCDC47-202ENST00000403162 HHEXQ03014 270 aa17.82■□□□□ 0.44
CCDC47-202ENST00000403162 ROM1Q03395 351 aa17.82■□□□□ 0.44
CCDC47-202ENST00000403162 PLPP7Q8NBV4 271 aa17.82■□□□□ 0.44
CCDC47-202ENST00000403162 ZNF563Q8TA94 476 aa17.82■□□□□ 0.44
CCDC47-202ENST00000403162 SLC41A2Q96JW4 573 aa17.82■□□□□ 0.44
CCDC47-202ENST00000403162 EDEM2Q9BV94 578 aa17.82■□□□□ 0.44
CCDC47-202ENST00000403162 DHDHQ9UQ10 334 aa17.82■□□□□ 0.44
CCDC47-202ENST00000403162 SLC22A13Q9Y226 551 aa17.82■□□□□ 0.44
CCDC47-202ENST00000403162 TNRC6BQ9UPQ9 1833 aaKnown RBP17.82■□□□□ 0.44
CCDC47-202ENST00000403162 XKRYO14609 159 aa17.81■□□□□ 0.44
CCDC47-202ENST00000403162 PRKNO60260 465 aaPredicted RBP17.81■□□□□ 0.44
CCDC47-202ENST00000403162 PNPP00491 289 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms