RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 IER3IP1Q9Y5U9 82 aa13.56□□□□□ -0.24
ATG4B-203ENST00000400772 XKRYO14609 159 aa13.55□□□□□ -0.24
ATG4B-203ENST00000400772 LMX1BO60663 402 aa13.55□□□□□ -0.24
ATG4B-203ENST00000400772 TXNDC12O95881 172 aa13.55□□□□□ -0.24
ATG4B-203ENST00000400772 SDHAP31040 664 aa13.55□□□□□ -0.24
ATG4B-203ENST00000400772 GUCA1AP43080 201 aaPredicted RBP13.55□□□□□ -0.24
ATG4B-203ENST00000400772 MAGEB1P43366 347 aa13.55□□□□□ -0.24
ATG4B-203ENST00000400772 GDI2P50395 445 aaKnown RBP13.55□□□□□ -0.24
ATG4B-203ENST00000400772 KLF3P57682 345 aaPredicted RBP13.55□□□□□ -0.24
ATG4B-203ENST00000400772 SPIBQ01892 262 aa13.55□□□□□ -0.24
ATG4B-203ENST00000400772 KRR1Q13601 381 aaKnown RBP13.55□□□□□ -0.24
ATG4B-203ENST00000400772 NKPD1Q17RQ9 610 aa13.55□□□□□ -0.24
ATG4B-203ENST00000400772 CHRFAM7AQ494W8 412 aa13.55□□□□□ -0.24
ATG4B-203ENST00000400772 GPR139Q6DWJ6 353 aa13.55□□□□□ -0.24
ATG4B-203ENST00000400772 DPY19L2P2Q6ZN68 376 aa13.55□□□□□ -0.24
ATG4B-203ENST00000400772 PTCHD4Q6ZW05 846 aa13.55□□□□□ -0.24
ATG4B-203ENST00000400772 SYT9Q86SS6 491 aa13.55□□□□□ -0.24
ATG4B-203ENST00000400772 ICA1LQ8NDH6 482 aa13.55□□□□□ -0.24
ATG4B-203ENST00000400772 GTF3AQ92664 365 aaKnown RBP13.55□□□□□ -0.24
ATG4B-203ENST00000400772 RDH5Q92781 318 aa13.55□□□□□ -0.24
ATG4B-203ENST00000400772 MARS2Q96GW9 593 aaKnown RBP13.55□□□□□ -0.24
ATG4B-203ENST00000400772 IL1RAPQ9NPH3 570 aa13.55□□□□□ -0.24
ATG4B-203ENST00000400772 HINT3Q9NQE9 182 aaKnown RBP13.55□□□□□ -0.24
ATG4B-203ENST00000400772 SLCO1C1Q9NYB5 712 aa13.55□□□□□ -0.24
ATG4B-203ENST00000400772 VSX1Q9NZR4 365 aaPredicted RBP13.55□□□□□ -0.24
ATG4B-203ENST00000400772 AURKCQ9UQB9 309 aa13.55□□□□□ -0.24
ATG4B-203ENST00000400772 LOC100289279A0A1B0GTE1 492 aa13.54□□□□□ -0.24
ATG4B-203ENST00000400772 C17orf100A8MU93 164 aa13.54□□□□□ -0.24
ATG4B-203ENST00000400772 SLC16A7O60669 478 aa13.54□□□□□ -0.24
ATG4B-203ENST00000400772 ICMTO60725 284 aa13.54□□□□□ -0.24
ATG4B-203ENST00000400772 GADD45GO95257 159 aa13.54□□□□□ -0.24
ATG4B-203ENST00000400772 NGFP01138 241 aa13.54□□□□□ -0.24
ATG4B-203ENST00000400772 IGHV3-13P01766 116 aa13.54□□□□□ -0.24
ATG4B-203ENST00000400772 IGFBP5P24593 272 aa13.54□□□□□ -0.24
ATG4B-203ENST00000400772 MPV17P39210 176 aa13.54□□□□□ -0.24
ATG4B-203ENST00000400772 CDKN2AP42771 156 aaKnown RBP13.54□□□□□ -0.24
ATG4B-203ENST00000400772 CHN2P52757 468 aa13.54□□□□□ -0.24
ATG4B-203ENST00000400772 SELENOVP59797 346 aa13.54□□□□□ -0.24
ATG4B-203ENST00000400772 PCBD1P61457 104 aa13.54□□□□□ -0.24
ATG4B-203ENST00000400772 SPATS1Q496A3 300 aa13.54□□□□□ -0.24
ATG4B-203ENST00000400772 SPATA46Q5T0L3 261 aa13.54□□□□□ -0.24
ATG4B-203ENST00000400772 OTPQ5XKR4 325 aa13.54□□□□□ -0.24
ATG4B-203ENST00000400772 FAM166AQ6J272 317 aa13.54□□□□□ -0.24
ATG4B-203ENST00000400772 SMARCD3Q6STE5 483 aa13.54□□□□□ -0.24
ATG4B-203ENST00000400772 SLC25A40Q8TBP6 338 aa13.54□□□□□ -0.24
ATG4B-203ENST00000400772 SNX18Q96RF0 628 aa13.54□□□□□ -0.24
ATG4B-203ENST00000400772 NDEL1Q9GZM8 345 aa13.54□□□□□ -0.24
ATG4B-203ENST00000400772 SYT4Q9H2B2 425 aa13.54□□□□□ -0.24
ATG4B-203ENST00000400772 CHODLQ9H9P2 273 aa13.54□□□□□ -0.24
ATG4B-203ENST00000400772 COA3Q9Y2R0 106 aaPredicted RBP13.54□□□□□ -0.24
ATG4B-203ENST00000400772 C12orf71A8MTZ7 269 aa13.53□□□□□ -0.24
ATG4B-203ENST00000400772 B2RBV5 119 aa13.53□□□□□ -0.24
ATG4B-203ENST00000400772 SOCS2O14508 198 aa13.53□□□□□ -0.24
ATG4B-203ENST00000400772 KHDRBS3O75525 346 aaKnown RBP13.53□□□□□ -0.24
ATG4B-203ENST00000400772 RP2O75695 350 aa13.53□□□□□ -0.24
ATG4B-203ENST00000400772 MPZL1O95297 269 aa13.53□□□□□ -0.24
ATG4B-203ENST00000400772 FABP3P05413 133 aa13.53□□□□□ -0.24
ATG4B-203ENST00000400772 ACHEP22303 614 aa13.53□□□□□ -0.24
ATG4B-203ENST00000400772 RRM2P31350 389 aa13.53□□□□□ -0.24
ATG4B-203ENST00000400772 SMIM11AP58511 58 aa13.53□□□□□ -0.24
ATG4B-203ENST00000400772 MRPS11P82912 194 aaKnown RBP13.53□□□□□ -0.24
ATG4B-203ENST00000400772 MXRA7P84157 204 aa13.53□□□□□ -0.24
ATG4B-203ENST00000400772 RFX4Q33E94 735 aa13.53□□□□□ -0.24
ATG4B-203ENST00000400772 MBNL2Q5VZF2 373 aaKnown RBP13.53□□□□□ -0.24
ATG4B-203ENST00000400772 RFPL4BQ6ZWI9 263 aa13.53□□□□□ -0.24
ATG4B-203ENST00000400772 ALDH16A1Q8IZ83 802 aa13.53□□□□□ -0.24
ATG4B-203ENST00000400772 HPS1Q92902 700 aa13.53□□□□□ -0.24
ATG4B-203ENST00000400772 MCUR1Q96AQ8 359 aa13.53□□□□□ -0.24
ATG4B-203ENST00000400772 C1orf159Q96HA4 380 aa13.53□□□□□ -0.24
ATG4B-203ENST00000400772 WACQ9BTA9 647 aa13.53□□□□□ -0.24
ATG4B-203ENST00000400772 OR2J1Q9GZK6 312 aa13.53□□□□□ -0.24
ATG4B-203ENST00000400772 NUAK2Q9H093 628 aa13.53□□□□□ -0.24
ATG4B-203ENST00000400772 KRCC1Q9NPI7 259 aaPredicted RBP13.53□□□□□ -0.24
ATG4B-203ENST00000400772 ZNF275Q9NSD4 429 aaPredicted RBP13.53□□□□□ -0.24
ATG4B-203ENST00000400772 NDE1Q9NXR1 346 aa13.53□□□□□ -0.24
ATG4B-203ENST00000400772 EIF3KQ9UBQ5 218 aaKnown RBP13.53□□□□□ -0.24
ATG4B-203ENST00000400772 GPR160Q9UJ42 338 aa13.53□□□□□ -0.24
ATG4B-203ENST00000400772 CDC42EP3Q9UKI2 254 aa13.53□□□□□ -0.24
ATG4B-203ENST00000400772 DCTN6O00399 190 aa13.52□□□□□ -0.25
ATG4B-203ENST00000400772 WNT9BO14905 357 aa13.52□□□□□ -0.25
ATG4B-203ENST00000400772 PPP1R3DO95685 299 aa13.52□□□□□ -0.25
ATG4B-203ENST00000400772 GPANK1O95872 356 aa13.52□□□□□ -0.25
ATG4B-203ENST00000400772 TGFAP01135 160 aa13.52□□□□□ -0.25
ATG4B-203ENST00000400772 T-ENOLP0DO92 83 aa13.52□□□□□ -0.25
ATG4B-203ENST00000400772 COX5BP10606 129 aa13.52□□□□□ -0.25
ATG4B-203ENST00000400772 ATP6V1B2P21281 511 aa13.52□□□□□ -0.25
ATG4B-203ENST00000400772 FPR3P25089 353 aa13.52□□□□□ -0.25
ATG4B-203ENST00000400772 MMP15P51511 669 aa13.52□□□□□ -0.25
ATG4B-203ENST00000400772 RPS6KA3P51812 740 aa13.52□□□□□ -0.25
ATG4B-203ENST00000400772 TMEM33P57088 247 aa13.52□□□□□ -0.25
ATG4B-203ENST00000400772 CCL8P80075 99 aa13.52□□□□□ -0.25
ATG4B-203ENST00000400772 GLO1Q04760 184 aa13.52□□□□□ -0.25
ATG4B-203ENST00000400772 ZNF718Q3SXZ3 478 aa13.52□□□□□ -0.25
ATG4B-203ENST00000400772 C1orf94Q6P1W5 598 aa13.52□□□□□ -0.25
ATG4B-203ENST00000400772 CYP2R1Q6VVX0 501 aa13.52□□□□□ -0.25
ATG4B-203ENST00000400772 ZDHHC21Q8IVQ6 265 aa13.52□□□□□ -0.25
ATG4B-203ENST00000400772 GLB1L2Q8IW92 636 aa13.52□□□□□ -0.25
ATG4B-203ENST00000400772 ABHD4Q8TB40 342 aa13.52□□□□□ -0.25
ATG4B-203ENST00000400772 KLF14Q8TD94 323 aaPredicted RBP13.52□□□□□ -0.25
ATG4B-203ENST00000400772 IPCEF1Q8WWN9 437 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms