RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 KCNRGQ8N5I3 272 aa8.15□□□□□ -1.11
PTPRM-202ENST00000400053 SLC16A11Q8NCK7 471 aa8.15□□□□□ -1.11
PTPRM-202ENST00000400053 HPSE2Q8WWQ2 592 aa8.15□□□□□ -1.11
PTPRM-202ENST00000400053 EPHX3Q9H6B9 360 aa8.15□□□□□ -1.11
PTPRM-202ENST00000400053 PCDHGA1Q9Y5H4 931 aa8.15□□□□□ -1.11
PTPRM-202ENST00000400053 KPTNQ9Y664 436 aa8.15□□□□□ -1.11
PTPRM-202ENST00000400053 DOCK1Q14185 1865 aa8.15□□□□□ -1.11
PTPRM-202ENST00000400053 SSC5DA1L4H1 1573 aa8.15□□□□□ -1.11
PTPRM-202ENST00000400053 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.15□□□□□ -1.11
PTPRM-202ENST00000400053 BET1O15155 118 aa8.15□□□□□ -1.11
PTPRM-202ENST00000400053 LGI1O95970 557 aa8.15□□□□□ -1.11
PTPRM-202ENST00000400053 PEX11BO96011 259 aa8.15□□□□□ -1.11
PTPRM-202ENST00000400053 CD1EP15812 388 aa8.15□□□□□ -1.11
PTPRM-202ENST00000400053 CD80P33681 288 aa8.15□□□□□ -1.11
PTPRM-202ENST00000400053 RAD52P43351 418 aa8.15□□□□□ -1.11
PTPRM-202ENST00000400053 TAS2R45P59539 299 aa8.15□□□□□ -1.11
PTPRM-202ENST00000400053 PFN3P60673 137 aa8.15□□□□□ -1.11
PTPRM-202ENST00000400053 LYSMD4Q5XG99 296 aa8.15□□□□□ -1.11
PTPRM-202ENST00000400053 DBX2Q6ZNG2 339 aa8.15□□□□□ -1.11
PTPRM-202ENST00000400053 TMEM99Q8N816 258 aa8.15□□□□□ -1.11
PTPRM-202ENST00000400053 FER1L6-AS2Q96M78 137 aa8.15□□□□□ -1.11
PTPRM-202ENST00000400053 NDUFB11Q9NX14 153 aa8.15□□□□□ -1.11
PTPRM-202ENST00000400053 A0A0B4J203 849 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 ZNF814B7Z6K7 855 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 ZNF264O43296 627 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 GIPP09681 153 aaPredicted RBP8.14□□□□□ -1.11
PTPRM-202ENST00000400053 DEFA4P12838 97 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 SPI1P17947 270 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 ENPP1P22413 925 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 TGM1P22735 817 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 RFX2P48378 723 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 NPY4RP50391 375 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 OR2B8PP59922 312 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 FABP5Q01469 135 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 PRSS36Q5K4E3 855 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 FAM57BQ71RH2 274 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 FAM26EQ8N5C1 309 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 TMEM178AQ8NBL3 297 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 TM4SF18Q96CE8 201 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 LYSMD1Q96S90 227 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 TEAD3Q99594 435 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 SRRQ9GZT4 340 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 HINT3Q9NQE9 182 aaKnown RBP8.14□□□□□ -1.11
PTPRM-202ENST00000400053 GAR1Q9NY12 217 aaKnown RBP8.14□□□□□ -1.11
PTPRM-202ENST00000400053 WSB2Q9NYS7 404 aaPredicted RBP8.14□□□□□ -1.11
PTPRM-202ENST00000400053 RNF150Q9ULK6 438 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 TMEM200CA6NKL6 621 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 YKT6O15498 198 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 PAX6P26367 422 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 PTBP1P26599 531 aaKnown RBP eCLIP8.14□□□□□ -1.112e-6■■■■□ 23.2
PTPRM-202ENST00000400053 TAGLN2P37802 199 aaKnown RBP8.14□□□□□ -1.11
PTPRM-202ENST00000400053 TAF9Q16594 264 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 CDONQ4KMG0 1287 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 FJX1Q86VR8 437 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 C1orf87Q8N0U7 546 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 OR8U1Q8NH10 309 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 SEH1LQ96EE3 360 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 C10orf90Q96M02 699 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 UTP23Q9BRU9 249 aaKnown RBP8.14□□□□□ -1.11
PTPRM-202ENST00000400053 SLIRPQ9GZT3 109 aaKnown RBP8.14□□□□□ -1.11
PTPRM-202ENST00000400053 ZNF385DQ9H6B1 395 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 MED16Q9Y2X0 877 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 SCN1AP35498 2009 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 PPP5D1E7EU14 171 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 M0QZ24 198 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 ABHD16AO95870 558 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 PMP2P02689 132 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 PIPP12273 146 aaPredicted RBP8.14□□□□□ -1.11
PTPRM-202ENST00000400053 FCGR2AP12318 317 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 FOLR1P15328 257 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 NAGAP17050 411 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 BLVRBP30043 206 aaPredicted RBP8.14□□□□□ -1.11
PTPRM-202ENST00000400053 SLC6A11P48066 632 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 UBE2IP63279 158 aaKnown RBP8.14□□□□□ -1.11
PTPRM-202ENST00000400053 BHLHA9Q7RTU4 235 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 SECTM1Q8WVN6 248 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 RBM38Q9H0Z9 239 aaKnown RBP8.14□□□□□ -1.11
PTPRM-202ENST00000400053 A4GALTQ9NPC4 353 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 TM7SF3Q9NS93 570 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 CGGBP1Q9UFW8 167 aaPredicted RBP8.14□□□□□ -1.11
PTPRM-202ENST00000400053 MRPS28Q9Y2Q9 187 aaKnown RBP8.14□□□□□ -1.11
PTPRM-202ENST00000400053 ADAMTSL1Q8N6G6 1762 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 TRBV11-1A0A0K0K1C0 115 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 ZAR1LA6NP61 321 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 NXPH2O95156 264 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 SLC2A10O95528 541 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 ITGBL1O95965 494 aaPredicted RBP8.14□□□□□ -1.11
PTPRM-202ENST00000400053 HPNP05981 417 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 SBK2P0C263 348 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 OR8U8P0C7N1 319 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 OR10A3P58181 314 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 ALKBH1Q13686 389 aaKnown RBP8.14□□□□□ -1.11
PTPRM-202ENST00000400053 TIGITQ495A1 244 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 FAM71E1Q6IPT2 247 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 TMEM217Q8N7C4 229 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 OR6M1Q8NGM8 313 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 PTDSS2Q9BVG9 487 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 MS4A8Q9BY19 250 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 TMPRSS5Q9H3S3 457 aa8.14□□□□□ -1.11
PTPRM-202ENST00000400053 ARFGEF1Q9Y6D6 1849 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms