RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 HRH3Q9Y5N1 445 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 MYH11P35749 1972 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 C5orf49A4QMS7 147 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 NPIPB15A6NHN6 443 aaPredicted RBP11.35□□□□□ -0.59
SMU1-201ENST00000397149 H7C2G1 150 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 AKR7A3O95154 331 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 GLAP06280 429 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 DUSP1P28562 367 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 GNG10P50151 68 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 FBXL16Q8N461 479 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 TMEM40Q8WWA1 233 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 GABARAPL1Q9H0R8 117 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 MAGT1Q9H0U3 335 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 OR5V1Q9UGF6 321 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 ADAM11O75078 769 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 EPHA2P29317 976 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 KIR2DS3Q14952 304 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 ZNF260Q3ZCT1 412 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 HENMT1Q5T8I9 393 aaKnown RBP11.35□□□□□ -0.59
SMU1-201ENST00000397149 RETREG3Q86VR2 466 aa11.35□□□□□ -0.59
SMU1-201ENST00000397149 RPL3LQ92901 407 aaKnown RBP11.35□□□□□ -0.59
SMU1-201ENST00000397149 IGLV3-22A0A075B6J6 115 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 AQP8O94778 261 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 UTS2O95399 124 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 CPMP14384 443 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 FGF7P21781 194 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 MMP12P39900 470 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 WDR5P61964 334 aaKnown RBP11.34□□□□□ -0.59
SMU1-201ENST00000397149 ZXDAP98168 799 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 HSF5Q4G112 596 aaPredicted RBP11.34□□□□□ -0.59
SMU1-201ENST00000397149 DRAXINQ8NBI3 349 aaPredicted RBP11.34□□□□□ -0.59
SMU1-201ENST00000397149 NAT6Q93015 286 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 LHX4Q969G2 390 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 RNF2Q99496 336 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 CABLES2Q9BTV7 478 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 SALL3Q9BXA9 1300 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 GPM6AP51674 278 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 CSNK1G2P78368 415 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 TMEM65Q6PI78 240 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 LYPD8Q6UX82 237 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 GABRG1Q8N1C3 465 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 C20orf85Q9H1P6 137 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 RALYQ9UKM9 306 aaKnown RBP11.34□□□□□ -0.59
SMU1-201ENST00000397149 ZNF140P52738 457 aaPredicted RBP11.34□□□□□ -0.59
SMU1-201ENST00000397149 FOXA1P55317 472 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 RELAQ04206 551 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 RPL22L1Q6P5R6 122 aaKnown RBP11.34□□□□□ -0.59
SMU1-201ENST00000397149 HSD11B1LQ7Z5J1 315 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 HAVCR2Q8TDQ0 301 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 ZNF296Q8WUU4 475 aaPredicted RBP11.34□□□□□ -0.59
SMU1-201ENST00000397149 SLC22A12Q96S37 553 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 PPRC1Q5VV67 1664 aaKnown RBP11.34□□□□□ -0.59
SMU1-201ENST00000397149 PDE4DIPQ5VU43 2346 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 CYB561P49447 251 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 FAM122BQ7Z309 247 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 CCDC190Q86UF4 302 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 SFTPA2Q8IWL1 248 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 SFTPA1Q8IWL2 248 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 PRSS3P2Q8NHM4 247 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 FBXO17Q96EF6 278 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 CTSFQ9UBX1 484 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 SIT1Q9Y3P8 196 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 U3KQ87 197 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 SELENOFO60613 162 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 EN2P19622 333 aaPredicted RBP11.34□□□□□ -0.59
SMU1-201ENST00000397149 ALOX5APP20292 161 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 CD80P33681 288 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 CTBSQ01459 385 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 DEFB109BQ30KR1 87 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 ZNF787Q6DD87 383 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 SIAH3Q8IW03 269 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 ARFGAP1Q8N6T3 406 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 OR51F2Q8NH61 342 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 SMIM7Q9BQ49 75 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 OR51B4Q9Y5P0 310 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 KIF20BQ96Q89 1820 aa11.34□□□□□ -0.59
SMU1-201ENST00000397149 SDCBPO00560 298 aaPredicted RBP11.33□□□□□ -0.59
SMU1-201ENST00000397149 XRCC2O43543 280 aa11.33□□□□□ -0.59
SMU1-201ENST00000397149 FDXRP22570 491 aa11.33□□□□□ -0.59
SMU1-201ENST00000397149 EIF4HQ15056 248 aaKnown RBP11.33□□□□□ -0.59
SMU1-201ENST00000397149 PCK2Q16822 640 aa11.33□□□□□ -0.59
SMU1-201ENST00000397149 ZNF788Q6ZQV5 615 aa11.33□□□□□ -0.59
SMU1-201ENST00000397149 NKX6-2Q9C056 277 aaPredicted RBP11.33□□□□□ -0.59
SMU1-201ENST00000397149 TRBV4-1A0A0J9YWV2 114 aa11.33□□□□□ -0.6
SMU1-201ENST00000397149 H0YGG7 62 aa11.33□□□□□ -0.6
SMU1-201ENST00000397149 LRRC56Q8IYG6 542 aaPredicted RBP11.33□□□□□ -0.6
SMU1-201ENST00000397149 KLHDC1Q8N7A1 406 aa11.33□□□□□ -0.6
SMU1-201ENST00000397149 SLC12A9Q9BXP2 914 aa11.33□□□□□ -0.6
SMU1-201ENST00000397149 NRSN2Q9GZP1 204 aa11.33□□□□□ -0.6
SMU1-201ENST00000397149 ZNF511Q8NB15 262 aa11.33□□□□□ -0.6
SMU1-201ENST00000397149 OR2AK2Q8NG84 335 aa11.33□□□□□ -0.6
SMU1-201ENST00000397149 SPACA5Q96QH8 159 aa11.33□□□□□ -0.6
SMU1-201ENST00000397149 ZNF2Q9BSG1 426 aaPredicted RBP11.33□□□□□ -0.6
SMU1-201ENST00000397149 PTDSS2Q9BVG9 487 aa11.33□□□□□ -0.6
SMU1-201ENST00000397149 ST6GALNAC4Q9H4F1 302 aa11.33□□□□□ -0.6
SMU1-201ENST00000397149 SLC17A4Q9Y2C5 497 aa11.33□□□□□ -0.6
SMU1-201ENST00000397149 IGHV3-15A0A0B4J1V0 119 aa11.33□□□□□ -0.6
SMU1-201ENST00000397149 PRKRAO75569 313 aaKnown RBP11.33□□□□□ -0.6
SMU1-201ENST00000397149 OPRM1P35372 400 aa11.33□□□□□ -0.6
SMU1-201ENST00000397149 PPOXP50336 477 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms