RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 RAB35Q15286 201 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 HIST3H3Q16695 136 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 CLEC12BQ2HXU8 276 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 NRN1LQ496H8 165 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 FOXB2Q5VYV0 432 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 GPR141Q7Z602 305 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 DPPA2Q7Z7J5 298 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 ZER1Q7Z7L7 766 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 OAFQ86UD1 273 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 AQP11Q8NBQ7 271 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 NOXO1Q8NFA2 376 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 NUP37Q8NFH4 326 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 ZNF420Q8TAQ5 688 aaPredicted RBP12.64□□□□□ -0.39
SEC13-208ENST00000397109 COX4I2Q96KJ9 171 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 DUSP21Q9H596 190 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 CA10Q9NS85 328 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 ARFGEF3Q5TH69 2177 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 ZNF503-AS2A6NEH8 195 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 H7C417 338 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 OR10H3O60404 316 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 RAB36O95755 333 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 IGHV4-39P01824 125 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 MAKP20794 623 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 FPR3P25089 353 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 CALCRP30988 508 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 GSSP48637 474 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 CRISP1P54107 249 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 CDC42P60953 191 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 RAB1AP62820 205 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 ARMC4Q5T2S8 1044 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 FAM205BPQ63HN1 556 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 PGBD2Q6P3X8 592 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 SLC22A24Q8N4F4 322 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 RHOXF1Q8NHV9 184 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 FNDC8Q8TC99 324 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 MCHR2Q969V1 340 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 MYCBPQ99417 103 aaPredicted RBP12.63□□□□□ -0.39
SEC13-208ENST00000397109 NIPSNAP1Q9BPW8 284 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 NDEL1Q9GZM8 345 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 RBM38Q9H0Z9 239 aaKnown RBP12.63□□□□□ -0.39
SEC13-208ENST00000397109 TMEM38BQ9NVV0 291 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 FBXO9Q9UK97 447 aaPredicted RBP12.63□□□□□ -0.39
SEC13-208ENST00000397109 SNX5Q9Y5X3 404 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 COMMD3-BMI1R4GMX3 469 aa12.63□□□□□ -0.39
SEC13-208ENST00000397109 CSPG4Q6UVK1 2322 aa12.62□□□□□ -0.39
SEC13-208ENST00000397109 IGHV2OR16-5A0A0B4J2B6 119 aa12.62□□□□□ -0.39
SEC13-208ENST00000397109 TRIM64BA6NI03 449 aa12.62□□□□□ -0.39
SEC13-208ENST00000397109 ZAR1LA6NP61 321 aa12.62□□□□□ -0.39
SEC13-208ENST00000397109 CDC42EP2O14613 210 aa12.62□□□□□ -0.39
SEC13-208ENST00000397109 IGHMP01871 453 aa12.62□□□□□ -0.39
SEC13-208ENST00000397109 CELA3BP08861 270 aa12.62□□□□□ -0.39
SEC13-208ENST00000397109 SERPINF1P36955 418 aa12.62□□□□□ -0.39
SEC13-208ENST00000397109 ZNF133P52736 654 aaPredicted RBP12.62□□□□□ -0.39
SEC13-208ENST00000397109 CTXN1P60606 82 aa12.62□□□□□ -0.39
SEC13-208ENST00000397109 RPL27P61353 136 aaKnown RBP12.62□□□□□ -0.39
SEC13-208ENST00000397109 MVKQ03426 396 aa12.62□□□□□ -0.39
SEC13-208ENST00000397109 RUNX1T1Q06455 604 aa12.62□□□□□ -0.39
SEC13-208ENST00000397109 PIGFQ07326 219 aa12.62□□□□□ -0.39
SEC13-208ENST00000397109 FHL1Q13642 323 aa12.62□□□□□ -0.39
SEC13-208ENST00000397109 SKA3Q8IX90 412 aa12.62□□□□□ -0.39
SEC13-208ENST00000397109 SYT14Q8NB59 555 aa12.62□□□□□ -0.39
SEC13-208ENST00000397109 OR9Q2Q8NGE9 314 aa12.62□□□□□ -0.39
SEC13-208ENST00000397109 OR51A7Q8NH64 312 aa12.62□□□□□ -0.39
SEC13-208ENST00000397109 FAM46AQ96IP4 442 aaKnown RBP12.62□□□□□ -0.39
SEC13-208ENST00000397109 RBP7Q96R05 134 aa12.62□□□□□ -0.39
SEC13-208ENST00000397109 TNFRSF13CQ96RJ3 184 aa12.62□□□□□ -0.39
SEC13-208ENST00000397109 ALG12Q9BV10 488 aa12.62□□□□□ -0.39
SEC13-208ENST00000397109 GSX1Q9H4S2 264 aaPredicted RBP12.62□□□□□ -0.39
SEC13-208ENST00000397109 ZNF442Q9H7R0 627 aa12.62□□□□□ -0.39
SEC13-208ENST00000397109 SEC61A2Q9H9S3 476 aa12.62□□□□□ -0.39
SEC13-208ENST00000397109 GDF2Q9UK05 429 aaPredicted RBP12.62□□□□□ -0.39
SEC13-208ENST00000397109 SPEF1Q9Y4P9 236 aa12.62□□□□□ -0.39
SEC13-208ENST00000397109 A6NIZ1 184 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 B9A039 149 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 NDUFS7O75251 213 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 ZNF14P17017 642 aaPredicted RBP12.61□□□□□ -0.39
SEC13-208ENST00000397109 ACVR1BP36896 505 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 GPR4P46093 362 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 CDH15P55291 814 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 RAP1BP61224 184 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 SNRPD2P62316 118 aaKnown RBP12.61□□□□□ -0.39
SEC13-208ENST00000397109 RAP1AP62834 184 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 SLC35A2P78381 396 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 HGFACQ04756 655 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 TSPAN31Q12999 210 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 TNK1Q13470 666 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 PTGES3Q15185 160 aaKnown RBP12.61□□□□□ -0.39
SEC13-208ENST00000397109 SWI5Q1ZZU3 235 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 CNPY1Q3B7I2 92 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 C10orf128Q5T292 105 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 LAIR2Q6ISS4 152 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 TMEM53Q6P2H8 277 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 CLEC9AQ6UXN8 241 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 KCTD8Q6ZWB6 473 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 MYPOPQ86VE0 399 aaPredicted RBP12.61□□□□□ -0.39
SEC13-208ENST00000397109 ENTHD1Q8IYW4 607 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 SPARTQ8N0X7 666 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 CIARTQ8N365 385 aaPredicted RBP12.61□□□□□ -0.39
SEC13-208ENST00000397109 SVOPQ8N4V2 548 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 LRRC75AQ8NAA5 344 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms