RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 B4DGG1 531 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 SULT1C2O00338 296 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 ST8SIA5O15466 376 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 FLRT2O43155 660 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 CDC123O75794 336 aaPredicted RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 GOSR1O95249 250 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 BGLAPP02818 100 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 SERPIND1P05546 499 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 HEXAP06865 529 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 DUX4L2P0CJ85 424 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 DUX4L3P0CJ86 424 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 DUX4L4P0CJ87 422 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 DUX4L5P0CJ88 424 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 DUX4L6P0CJ89 424 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 DUX4L7P0CJ90 424 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 FOLR2P14207 255 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 PVRP15151 417 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 FOLR1P15328 257 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 RPA2P15927 270 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 CD82P27701 267 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 SHC1P29353 583 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 PTGDSP41222 190 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 CCR9P51686 369 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 NR0B1P51843 470 aaKnown RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 SUCLG1P53597 346 aaKnown RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 GFERP55789 205 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 OR10A3P58181 314 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 TAS2R41P59536 307 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 PSMA6P60900 246 aaKnown RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 OC90Q02509 493 aaPredicted RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 ZNF791Q3KP31 576 aaPredicted RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 VHLLQ6RSH7 139 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 MEPCEQ7L2J0 689 aaKnown RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 CBLN2Q8IUK8 224 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 DMRTC2Q8IXT2 367 aaPredicted RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 OR4F15Q8NGB8 312 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 OR5T3Q8NGG3 340 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 MAFAQ8NHW3 353 aaPredicted RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 THEM6Q8WUY1 208 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 TCEAL3Q969E4 200 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 RNF166Q96A37 237 aaPredicted RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 ZG16BQ96DA0 208 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 PEX11GQ96HA9 241 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 MRI1Q9BV20 369 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 PLA2G12AQ9BZM1 189 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 VN1R1Q9GZP7 353 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 ARL6Q9H0F7 186 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 UBQLN3Q9H347 655 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 TMEM27Q9HBJ8 222 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 HRASLSQ9HDD0 168 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 TAS2R5Q9NYW4 299 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 LRFN1Q9P244 771 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 DUX4Q9UBX2 424 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 SH3BGRL2Q9UJC5 107 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 MED31Q9Y3C7 131 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 OR10H1Q9Y4A9 318 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 VCANP13611 3396 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 TRAV1-2A0A0B4J238 106 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 FTCDNL1E5RQL4 147 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 UBE2CO00762 179 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 SOCS6O14544 535 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 SMAD9O15198 467 aaKnown RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 ARPC5O15511 151 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 SAGP10523 405 aaPredicted RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 PVALBP20472 110 aaPredicted RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 SLC6A6P31641 620 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 GABRA3P34903 492 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 GDNFP39905 211 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 RGS8P57771 180 aaPredicted RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 ECH1Q13011 328 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 EXT1Q16394 746 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 ZNF74Q16587 644 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 HLA-BQ31612 363 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 CCDC157Q569K6 752 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 HAGHLQ6PII5 290 aaPredicted RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 ANGPTL8Q6UXH0 198 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 PIP4P1Q86T03 277 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 SVBPQ8N300 66 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 FAM160A2Q8N612 972 aaPredicted RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 RELL2Q8NC24 303 aaPredicted RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 OR10K1Q8NGX5 313 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 OR5W2Q8NH69 310 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 ZNF519Q8TB69 540 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 NDC1Q9BTX1 674 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 RNF122Q9H9V4 155 aa4.83□□□□□ -1.64
VPS41-203ENST00000395969 SIRT4Q9Y6E7 314 aaPredicted RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 PRRC2BQ5JSZ5 2229 aaKnown RBP4.83□□□□□ -1.64
VPS41-203ENST00000395969 A0A0A6YYC8 382 aaPredicted RBP4.82□□□□□ -1.64
VPS41-203ENST00000395969 A0A1B0GWA3 101 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 GXYLT2A0PJZ3 443 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 MEX3AA1L020 520 aaKnown RBP4.82□□□□□ -1.64
VPS41-203ENST00000395969 OR6C68A6NDL8 312 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 PGPEP1LA6NFU8 196 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 I3L1I5 382 aaPredicted RBP4.82□□□□□ -1.64
VPS41-203ENST00000395969 GPR31O00270 319 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 CREBL2O60519 120 aaPredicted RBP4.82□□□□□ -1.64
VPS41-203ENST00000395969 SERPINA3P01011 423 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 UBBP0CG47 229 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 UBCP0CG48 685 aaKnown RBP4.82□□□□□ -1.64
VPS41-203ENST00000395969 ADCYAP1P18509 176 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms