RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 ZNF684Q5T5D7 378 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 C1orf185Q5T7R7 199 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 CORO6Q6QEF8 472 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 FAM214BQ7L5A3 538 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 YIPF7Q8N8F6 280 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 OR52N5Q8NH56 324 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 NABP1Q96AH0 204 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 ISOC1Q96CN7 298 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 PELI1Q96FA3 418 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 ACOXLQ9NUZ1 547 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 TMEM38BQ9NVV0 291 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 MRM2Q9UI43 246 aaKnown RBP17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 ENPP5Q9UJA9 477 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 METTL15A6NJ78 407 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 TTLL8A6PVC2 850 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 SULT1C4O75897 302 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 NPR2P20594 1047 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 TMBIM6P55061 237 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 TAS2R43P59537 309 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 SIRPAP78324 504 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 TPBGQ13641 420 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 LY6DQ14210 128 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 KRT77Q7Z794 578 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 PHC2Q8IXK0 858 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 OR8B4Q96RC9 309 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 FOXB1Q99853 325 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 ZNF416Q9BWM5 594 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 MROQ9BYG7 248 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 LHFPL6Q9Y693 200 aa17.99■□□□□ 0.47
VCPKMT-202ENST00000395860 FREM1Q5H8C1 2179 aa17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 PIEZO2Q9H5I5 2752 aa17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 MBD3L4A6NDZ8 208 aaPredicted RBP17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 MBD3L3A6NE82 208 aaPredicted RBP17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 MBD3L5A6NJ08 208 aaPredicted RBP17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 E9PI62 339 aa17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 ERVH48-1M5A8F1 160 aa17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 PRRG2O14669 202 aa17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 CELP19835 753 aa17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 NR4A1P22736 598 aa17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 PER3P56645 1201 aa17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 RTL6Q6ICC9 239 aa17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 LRRN1Q6UXK5 716 aa17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 SPATC1Q76KD6 591 aa17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 EGFL6Q8IUX8 553 aa17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 LRRC18Q8N456 261 aa17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 CNEP1R1Q8N9A8 125 aa17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 MBD3L2Q8NHZ7 208 aaPredicted RBP17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 ST7LQ8TDW4 575 aa17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 RAB2BQ8WUD1 216 aa17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 C1orf198Q9H425 327 aa17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 NDUFB11Q9NX14 153 aa17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 SLCO1C1Q9NYB5 712 aa17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 ASH2LQ9UBL3 628 aa17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 PRSS50Q9UI38 385 aa17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 GRIP1Q9Y3R0 1128 aa17.98■□□□□ 0.47
VCPKMT-202ENST00000395860 RPL36A-HNRNPH2H7BZ11 118 aa17.97■□□□□ 0.47
VCPKMT-202ENST00000395860 HOXD4P09016 255 aaPredicted RBP17.97■□□□□ 0.47
VCPKMT-202ENST00000395860 OR3A2P47893 321 aa17.97■□□□□ 0.47
VCPKMT-202ENST00000395860 FAPQ12884 760 aa17.97■□□□□ 0.47
VCPKMT-202ENST00000395860 GUSBP1Q15486 140 aa17.97■□□□□ 0.47
VCPKMT-202ENST00000395860 STK11Q15831 433 aa17.97■□□□□ 0.47
VCPKMT-202ENST00000395860 SLC16A12Q6ZSM3 486 aa17.97■□□□□ 0.47
VCPKMT-202ENST00000395860 ABHD12BQ7Z5M8 362 aaPredicted RBP17.97■□□□□ 0.47
VCPKMT-202ENST00000395860 ZNF679Q8IYX0 411 aa17.97■□□□□ 0.47
VCPKMT-202ENST00000395860 SIAEQ9HAT2 523 aa17.97■□□□□ 0.47
VCPKMT-202ENST00000395860 GDF2Q9UK05 429 aaPredicted RBP17.97■□□□□ 0.47
VCPKMT-202ENST00000395860 FAM215AQ9Y5M1 114 aa17.97■□□□□ 0.47
VCPKMT-202ENST00000395860 SPENQ96T58 3664 aaKnown RBP17.97■□□□□ 0.47
VCPKMT-202ENST00000395860 ZNF701M0R085 212 aaPredicted RBP17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 RPP14O95059 124 aaKnown RBP17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 B4GALT1P15291 398 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 GADD45AP24522 165 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 PSMB10P40306 273 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 ROM1Q03395 351 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 FAM27BQ5VT28 67 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 LIPNQ5VXI9 398 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 ATCAYQ86WG3 371 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 MAP6Q96JE9 813 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 TP63Q9H3D4 680 aaPredicted RBP17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 ELOVL3Q9HB03 270 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 BSNQ9UPA5 3926 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 HSPB2A8KAH6 182 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 GABARAPO95166 117 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 ABHD16AO95870 558 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 WNT11O96014 354 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 PSMA1P25786 263 aaKnown RBP17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 RBPJQ06330 500 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 MRPL28Q13084 256 aaKnown RBP17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 GPR50Q13585 617 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 ENDOGQ14249 297 aaKnown RBP17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 HSPB2Q16082 182 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 FBXW9Q5XUX1 488 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 ZNF813Q6ZN06 617 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 CFAP77Q6ZQR2 320 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 SEM1Q6ZVN7 128 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 HAVCR2Q8TDQ0 301 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 C12orf43Q96C57 262 aaKnown RBP17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 SLAMF6Q96DU3 332 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 CENPMQ9NSP4 180 aa17.96■□□□□ 0.47
VCPKMT-202ENST00000395860 SIRT4Q9Y6E7 314 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms