RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 EXO5Q9H790 373 aa18.56■□□□□ 0.56
CLK3-202ENST00000395066 KIF26BQ2KJY2 2108 aa18.56■□□□□ 0.56
CLK3-202ENST00000395066 RAB11BQ15907 218 aa18.56■□□□□ 0.56
CLK3-202ENST00000395066 ZNF627Q7L945 461 aa18.56■□□□□ 0.56
CLK3-202ENST00000395066 LMX1AQ8TE12 382 aa18.56■□□□□ 0.56
CLK3-202ENST00000395066 DUSP19Q8WTR2 217 aa18.56■□□□□ 0.56
CLK3-202ENST00000395066 TAS2R4Q9NYW5 299 aa18.56■□□□□ 0.56
CLK3-202ENST00000395066 PLCL2Q9UPR0 1127 aa18.56■□□□□ 0.56
CLK3-202ENST00000395066 IL11P20809 199 aa18.55■□□□□ 0.56
CLK3-202ENST00000395066 ADAM8P78325 824 aa18.55■□□□□ 0.56
CLK3-202ENST00000395066 VWA2Q5GFL6 755 aa18.55■□□□□ 0.56
CLK3-202ENST00000395066 EMC4Q5J8M3 183 aa18.55■□□□□ 0.56
CLK3-202ENST00000395066 OR1J4Q8NGS1 313 aa18.55■□□□□ 0.56
CLK3-202ENST00000395066 MARC2Q969Z3 335 aa18.55■□□□□ 0.56
CLK3-202ENST00000395066 ADIPOR1Q96A54 375 aa18.55■□□□□ 0.56
CLK3-202ENST00000395066 ZNF416Q9BWM5 594 aa18.55■□□□□ 0.56
CLK3-202ENST00000395066 DCDC2BA2VCK2 349 aa18.55■□□□□ 0.56
CLK3-202ENST00000395066 RFPL4AA6NLU0 287 aa18.55■□□□□ 0.56
CLK3-202ENST00000395066 RFPL4AL1F8VTS6 287 aa18.55■□□□□ 0.56
CLK3-202ENST00000395066 DNASE2O00115 360 aaPredicted RBP18.55■□□□□ 0.56
CLK3-202ENST00000395066 CDC40O60508 579 aaKnown RBP eCLIP18.55■□□□□ 0.56
CLK3-202ENST00000395066 LMX1BO60663 402 aa18.55■□□□□ 0.56
CLK3-202ENST00000395066 OR6A2O95222 327 aa18.55■□□□□ 0.56
CLK3-202ENST00000395066 PRSS3P35030 304 aa18.55■□□□□ 0.56
CLK3-202ENST00000395066 RORAP35398 523 aa18.55■□□□□ 0.56
CLK3-202ENST00000395066 ZNF169Q14929 603 aaPredicted RBP18.55■□□□□ 0.56
CLK3-202ENST00000395066 TMED4Q7Z7H5 227 aa18.55■□□□□ 0.56
CLK3-202ENST00000395066 PTDSS2Q9BVG9 487 aa18.55■□□□□ 0.56
CLK3-202ENST00000395066 SLC6A15Q9H2J7 730 aa18.55■□□□□ 0.56
CLK3-202ENST00000395066 TMEM14AQ9Y6G1 99 aa18.55■□□□□ 0.56
CLK3-202ENST00000395066 A0A1B0GW55 424 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 DDAH2O95865 285 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 CSN2P05814 226 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 DUX4L2P0CJ85 424 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 DUX4L3P0CJ86 424 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 DUX4L4P0CJ87 422 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 DUX4L5P0CJ88 424 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 DUX4L6P0CJ89 424 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 DUX4L7P0CJ90 424 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 LIPCP11150 499 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 HLA-DOBP13765 273 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 IL12BP29460 328 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 CSF2RBP32927 897 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 SERTAD2Q14140 314 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.54■□□□□ 0.56
CLK3-202ENST00000395066 C9orf40Q8IXQ3 194 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 ZNF721Q8TF20 911 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 ASB13Q8WXK3 278 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 NPAS1Q99742 590 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 PCDHB16Q9NRJ7 776 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 DUX4Q9UBX2 424 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 ZNF230Q9UIE0 474 aaPredicted RBP18.54■□□□□ 0.56
CLK3-202ENST00000395066 PRSS37A4D1T9 235 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 SHISA7A6NL88 538 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 PLATP00750 562 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 DEFB133Q30KQ1 61 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 GLYATL3Q5SZD4 288 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 C16orf47Q6ZP98 133 aaPredicted RBP18.54■□□□□ 0.56
CLK3-202ENST00000395066 SLC46A1Q96NT5 459 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 TINAGL1Q9GZM7 467 aaPredicted RBP18.54■□□□□ 0.56
CLK3-202ENST00000395066 POFUT1Q9H488 388 aa18.54■□□□□ 0.56
CLK3-202ENST00000395066 TRAV14DV4A0A0A6YYC5 116 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 C2orf72A6NCS6 295 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 SIGLEC5O15389 551 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 SLC25A12O75746 678 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 ZNF432O94892 652 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 UBBP0CG47 229 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 UBCP0CG48 685 aaKnown RBP18.53■□□□□ 0.56
CLK3-202ENST00000395066 RPS27AP62979 156 aaKnown RBP18.53■□□□□ 0.56
CLK3-202ENST00000395066 UBA52P62987 128 aaKnown RBP18.53■□□□□ 0.56
CLK3-202ENST00000395066 SIGLEC14Q08ET2 396 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 TMEM225Q6GV28 225 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 STEAP1BQ6NZ63 245 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 GALNT16Q8N428 558 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 OR10K1Q8NGX5 313 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 ST8SIA2Q92186 375 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 LAT2Q9GZY6 243 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 DHDHQ9UQ10 334 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 LOC100289279A0A1B0GTE1 492 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 LOC101059948A0A1B0GTJ6 334 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 TMEM150CB9EJG8 249 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 SLC17A2O00624 439 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 ALOX12BO75342 701 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 MGMTP16455 207 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 RAB3AP20336 220 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 SPOCK1Q08629 439 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 CCINQ13939 588 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 EIF2B1Q14232 305 aaKnown RBP18.53■□□□□ 0.56
CLK3-202ENST00000395066 MOGAT2Q3SYC2 334 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 SHISA6Q6ZSJ9 500 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 WDFY1Q8IWB7 410 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 ZNF679Q8IYX0 411 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 CLEC1AQ8NC01 280 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 CLRN3Q8NCR9 226 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 ADAMTS18Q8TE60 1221 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 LRRC46Q96FV0 321 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 CCNL2Q96S94 520 aaPredicted RBP18.53■□□□□ 0.56
CLK3-202ENST00000395066 MESP1Q9BRJ9 268 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 PDE7BQ9NP56 450 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 FBXO4Q9UKT5 387 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms