RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 MFGE8Q08431 387 aaPredicted RBP16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 TOMM34Q15785 309 aaPredicted RBP16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 HYAL4Q2M3T9 481 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 TEX30Q5JUR7 227 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 TFAP2EQ6VUC0 442 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 ZNF679Q8IYX0 411 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 PRR22Q8IZ63 422 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 PTPMT1Q8WUK0 201 aaPredicted RBP16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 MRPL22Q9NWU5 206 aaKnown RBP16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 GPR160Q9UJ42 338 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 KIF26BQ2KJY2 2108 aa16.51■□□□□ 0.23
PCDHA1-202ENST00000394633 WISP1O95388 367 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 PLGP00747 810 aaPredicted RBP16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 OR4E1P0C645 316 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 THEGLP0DJG4 465 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 GALNSP34059 522 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 TAS2R19P59542 299 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 ACTBP60709 375 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 ACTG1P63261 375 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 FZD2Q14332 565 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 TMEM225Q6GV28 225 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 ZNF454Q8N9F8 522 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 OIT3Q8WWZ8 545 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 ADOQ96SZ5 270 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 LAT2Q9GZY6 243 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 GPR27Q9NS67 375 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 FBXL2Q9UKC9 423 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 TMEM82A0PJX8 343 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 M0QYG6 137 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 XKRYO14609 159 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 ICOSLGO75144 302 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 RAB3DO95716 219 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 PMS2P2O95744 297 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 HPP00738 406 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 SPARCP09486 303 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 BCKDHBP21953 392 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 SERTAD2Q14140 314 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 TOMM20Q15388 145 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 NDUFAF7Q7L592 441 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 GALNT16Q8N428 558 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 C12orf45Q8N5I9 185 aaPredicted RBP16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 TMEM229BQ8NBD8 167 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 ASB5Q8WWX0 329 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 ASB13Q8WXK3 278 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 GAL3ST1Q99999 423 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 TINAGL1Q9GZM7 467 aaPredicted RBP16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 PNO1Q9NRX1 252 aaKnown RBP16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 ZNF230Q9UIE0 474 aaPredicted RBP16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 DHDHQ9UQ10 334 aa16.5■□□□□ 0.23
PCDHA1-202ENST00000394633 SPTY2D1-AS1A0A0U1RR47 76 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 D6RAR5 112 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 CXCR1P25024 350 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 GABRA4P48169 554 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 ZNF273Q14593 569 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 TMEM205Q6UW68 189 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 MDGA2Q7Z553 956 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 EIF4E3Q8N5X7 224 aaKnown RBP16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 RELL2Q8NC24 303 aaPredicted RBP16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 CCDC107Q8WV48 283 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 METTL21AQ8WXB1 218 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 ASB17Q8WXJ9 295 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 TCTN2Q96GX1 697 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 SLC41A2Q96JW4 573 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 PELOQ9BRX2 385 aaKnown RBP16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 TAS2R4Q9NYW5 299 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 UPB1Q9UBR1 384 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 TRAV36DV7A0A075B6V5 113 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 PRSS37A4D1T9 235 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 SULT1C2O00338 296 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 SDC3O75056 442 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 ALOX12BO75342 701 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 FREM3P0C091 2139 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 CXCL12P48061 93 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 INSM1Q01101 510 aaPredicted RBP16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 NR0B2Q15466 257 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 ETFDHQ16134 617 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 SLC18B1Q6NT16 456 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 ZNF627Q7L945 461 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 TMED4Q7Z7H5 227 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 ZNF519Q8TB69 540 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 C8orf44Q96CB5 159 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 POTEKPQ9BYX7 375 aa16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 CGGBP1Q9UFW8 167 aaPredicted RBP16.49■□□□□ 0.23
PCDHA1-202ENST00000394633 IGLV1-36A0A0B4J1U3 117 aa16.48■□□□□ 0.23
PCDHA1-202ENST00000394633 HCRTR2O43614 444 aa16.48■□□□□ 0.23
PCDHA1-202ENST00000394633 SLC16A7O60669 478 aa16.48■□□□□ 0.23
PCDHA1-202ENST00000394633 ZNF735P0CB33 412 aa16.48■□□□□ 0.23
PCDHA1-202ENST00000394633 IGFBP3P17936 291 aaPredicted RBP16.48■□□□□ 0.23
PCDHA1-202ENST00000394633 HTR2CP28335 458 aa16.48■□□□□ 0.23
PCDHA1-202ENST00000394633 SLC6A8P48029 635 aa16.48■□□□□ 0.23
PCDHA1-202ENST00000394633 FNTBP49356 437 aa16.48■□□□□ 0.23
PCDHA1-202ENST00000394633 ROM1Q03395 351 aa16.48■□□□□ 0.23
PCDHA1-202ENST00000394633 ACKR1Q16570 336 aa16.48■□□□□ 0.23
PCDHA1-202ENST00000394633 GLT8D1Q68CQ7 371 aa16.48■□□□□ 0.23
PCDHA1-202ENST00000394633 STEAP2Q8NFT2 490 aa16.48■□□□□ 0.23
PCDHA1-202ENST00000394633 OR52H1Q8NGJ2 320 aa16.48■□□□□ 0.23
PCDHA1-202ENST00000394633 SLC25A36Q96CQ1 311 aa16.48■□□□□ 0.23
PCDHA1-202ENST00000394633 MRPS24Q96EL2 167 aaKnown RBP16.48■□□□□ 0.23
PCDHA1-202ENST00000394633 ZNF285Q96NJ3 590 aa16.48■□□□□ 0.23
PCDHA1-202ENST00000394633 SLC46A1Q96NT5 459 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms