RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 ZNF649Q9BS31 505 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 TRAV36DV7A0A075B6V5 113 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 K7EQS6 105 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 CTAG2O75638 210 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 PMS2P2O95744 297 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 DPP4P27487 766 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 PMPCAQ10713 525 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 SLC17A1Q14916 467 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 TOMM34Q15785 309 aaPredicted RBP14.61□□□□□ -0.07
PCDH1-203ENST00000394536 NPSR1Q6W5P4 371 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 ZNF704Q6ZNC4 412 aaPredicted RBP14.61□□□□□ -0.07
PCDH1-203ENST00000394536 ZNF679Q8IYX0 411 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 LSMEM1Q8N8F7 131 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 PNLDC1Q8NA58 520 aaKnown RBP14.61□□□□□ -0.07
PCDH1-203ENST00000394536 STOML3Q8TAV4 291 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 HGDQ93099 445 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 MED29Q9NX70 200 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 CD207Q9UJ71 328 aa14.61□□□□□ -0.07
PCDH1-203ENST00000394536 SNRNP200O75643 2136 aaKnown RBP14.6□□□□□ -0.07
PCDH1-203ENST00000394536 GSTZ1O43708 216 aaPredicted RBP14.6□□□□□ -0.07
PCDH1-203ENST00000394536 OR2T1O43869 369 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 FAM69BQ5VUD6 431 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 DCAF12L2Q5VW00 463 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 TMEM81Q6P7N7 255 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 PAPD4Q6PIY7 484 aaKnown RBP14.6□□□□□ -0.07
PCDH1-203ENST00000394536 GRAMD2AQ8IUY3 354 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 FOXRED1Q96CU9 486 aaPredicted RBP14.6□□□□□ -0.07
PCDH1-203ENST00000394536 TCTN2Q96GX1 697 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 VSTM2LQ96N03 204 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 OBP2AQ9NY56 170 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 HRH3Q9Y5N1 445 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 NOTCH4Q99466 2003 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 LOC107986453A0A1B0GWG9 222 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 UBBP0CG47 229 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 UBCP0CG48 685 aaKnown RBP14.6□□□□□ -0.07
PCDH1-203ENST00000394536 TMEM244Q5VVB8 128 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 TMEM65Q6PI78 240 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 SLC43A2Q8N370 569 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 OR10R2Q8NGX6 335 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 TTC9Q92623 222 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 ABHD6Q9BV23 337 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 JAM3Q9BX67 310 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 OPN4Q9UHM6 478 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 FBXO24O75426 580 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 STK17BO94768 372 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 GAB4Q2WGN9 574 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 C9orf50Q5SZB4 431 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 ZNF321PQ8N8H1 164 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 HAVCR2Q8TDQ0 301 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 PPP1R1CQ8WVI7 109 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 ASB17Q8WXJ9 295 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 VWCEQ96DN2 955 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 C4orf45Q96LM5 186 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 SLC25A21Q9BQT8 299 aaPredicted RBP14.6□□□□□ -0.07
PCDH1-203ENST00000394536 TMEM231Q9H6L2 316 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 OR52A1Q9UKL2 312 aa14.6□□□□□ -0.07
PCDH1-203ENST00000394536 VSTM2BA6NLU5 285 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 CT45A8P0DMV1 189 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 CT45A9P0DMV2 189 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 ALOX5APP20292 161 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 HSD17B7P56937 341 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 RPL27P61353 136 aaKnown RBP14.59□□□□□ -0.07
PCDH1-203ENST00000394536 PLA2G7Q13093 441 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 CT45A2Q5DJT8 189 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 C16orf47Q6ZP98 133 aaPredicted RBP14.59□□□□□ -0.07
PCDH1-203ENST00000394536 OR1J4Q8NGS1 313 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 TSPAN32Q96QS1 320 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 SMIM3Q9BZL3 60 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 BANF2Q9H503 90 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 SERINC1Q9NRX5 453 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 KIF25Q9UIL4 384 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 A0A0D9SG52 128 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 C17orf51A8MQB3 221 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 F5H5K5 113 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 IL5P05113 134 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 VSIG10L2P0DP72 767 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 NPY4RP50391 375 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 ZNF41P51814 821 aaPredicted RBP14.59□□□□□ -0.07
PCDH1-203ENST00000394536 C1orf140Q5VVS0 124 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 ADGRG3Q86Y34 549 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 FBRSQ9HAH7 460 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 OR4C45A6NMZ5 311 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 SHOXO15266 292 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 ERCC1P07992 297 aaPredicted RBP14.59□□□□□ -0.07
PCDH1-203ENST00000394536 ADRA2CP18825 462 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 DRD1P21728 446 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 FBXO46Q6PJ61 603 aaPredicted RBP14.59□□□□□ -0.07
PCDH1-203ENST00000394536 SEZ6L2Q6UXD5 910 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 ZNF784Q8NCA9 323 aaPredicted RBP14.59□□□□□ -0.07
PCDH1-203ENST00000394536 SLC46A1Q96NT5 459 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 GLS2Q9UI32 602 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 GMEB2Q9UKD1 530 aa14.59□□□□□ -0.07
PCDH1-203ENST00000394536 RPH3AQ9Y2J0 694 aaPredicted RBP14.59□□□□□ -0.07
PCDH1-203ENST00000394536 M0R036 132 aa14.58□□□□□ -0.07
PCDH1-203ENST00000394536 KIR2DL1P43626 348 aaPredicted RBP14.58□□□□□ -0.07
PCDH1-203ENST00000394536 CSNK2A1P68400 391 aaPredicted RBP14.58□□□□□ -0.07
PCDH1-203ENST00000394536 ELFN2Q5R3F8 820 aa14.58□□□□□ -0.07
PCDH1-203ENST00000394536 ANKRD16Q6P6B7 361 aa14.58□□□□□ -0.07
PCDH1-203ENST00000394536 ANGPTL5Q86XS5 388 aa14.58□□□□□ -0.07
PCDH1-203ENST00000394536 CSNK2A3Q8NEV1 391 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms