RNA–Protein interactions for RNA: ENST00000394120.6

DYSF-202, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-202ENST00000394120 SRPK3Q9UPE1 567 aa11.88□□□□□ -0.51
DYSF-202ENST00000394120 ZNF354AO60765 605 aaPredicted RBP11.88□□□□□ -0.51
DYSF-202ENST00000394120 MSMO1Q15800 293 aa11.88□□□□□ -0.51
DYSF-202ENST00000394120 ZNF239Q16600 458 aaKnown RBP11.88□□□□□ -0.51
DYSF-202ENST00000394120 SMUG1Q53HV7 270 aa11.88□□□□□ -0.51
DYSF-202ENST00000394120 CCDC71Q8IV32 467 aaPredicted RBP11.88□□□□□ -0.51
DYSF-202ENST00000394120 MISPQ8IVT2 679 aa11.88□□□□□ -0.51
DYSF-202ENST00000394120 NUDCD2Q8WVJ2 157 aa11.88□□□□□ -0.51
DYSF-202ENST00000394120 NRAPQ86VF7 1730 aa11.88□□□□□ -0.51
DYSF-202ENST00000394120 ARID1BQ8NFD5 2236 aaPredicted RBP11.87□□□□□ -0.51
DYSF-202ENST00000394120 HSPB2A8KAH6 182 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 TO15178 435 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 TXNDC12O95881 172 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 H2AFB1P0C5Y9 115 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 RRASP10301 218 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 ZNF250P15622 560 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 FCGR2CP31995 323 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 RPP30P78346 268 aaKnown RBP11.87□□□□□ -0.51
DYSF-202ENST00000394120 HSPB2Q16082 182 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 MIXL1Q9H2W2 232 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 HSBP1L1C9JCN9 74 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 H3BNC9 293 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 RPL12P30050 165 aaKnown RBP11.87□□□□□ -0.51
DYSF-202ENST00000394120 RPS27P42677 84 aaKnown RBP11.87□□□□□ -0.51
DYSF-202ENST00000394120 C8orf33Q9H7E9 229 aaPredicted RBP11.87□□□□□ -0.51
DYSF-202ENST00000394120 NECAP2Q9NVZ3 263 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 PLA2G10O15496 165 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 MT-ND4LP03901 98 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 ERVK-16P61578 105 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 C11orf87Q6NUJ2 197 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 DND1Q8IYX4 353 aaKnown RBP11.87□□□□□ -0.51
DYSF-202ENST00000394120 OR6K3Q8NGY3 331 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 ZNF296Q8WUU4 475 aaPredicted RBP11.87□□□□□ -0.51
DYSF-202ENST00000394120 HSD17B8Q92506 261 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 SHDQ96IW2 340 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 TPSD1Q9BZJ3 242 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 SERTAD4Q9NUC0 356 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.87□□□□□ -0.51
DYSF-202ENST00000394120 ANKRD30BLA7E2S9 258 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 TRAPPC2LH3BP13 241 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 HPNP05981 417 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 TMEM176BQ3YBM2 270 aaPredicted RBP11.87□□□□□ -0.51
DYSF-202ENST00000394120 PHLDA2Q53GA4 152 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 PDZD11Q5EBL8 140 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 ZFPM2Q8WW38 1151 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 TTC9Q92623 222 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 ABHD1Q96SE0 405 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 TBPP20226 339 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 RAB1AP62820 205 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 MAMSTRQ6ZN01 415 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 LRRC18Q8N456 261 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 OR2G2Q8NGZ5 317 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 PATZ1Q9HBE1 687 aaKnown RBP11.87□□□□□ -0.51
DYSF-202ENST00000394120 CYB5R1Q9UHQ9 305 aa11.87□□□□□ -0.51
DYSF-202ENST00000394120 EXOGQ9Y2C4 368 aaKnown RBP11.87□□□□□ -0.51
DYSF-202ENST00000394120 CCDC85CA6NKD9 419 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 ZNF133P52736 654 aaPredicted RBP11.86□□□□□ -0.51
DYSF-202ENST00000394120 MLC1Q15049 377 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 RAB30Q15771 203 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 ADIRFQ15847 76 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 DEFB133Q30KQ1 61 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 CST9LP1Q5W188 147 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 ZNF425Q6IV72 752 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 TMEM182Q6ZP80 229 aaPredicted RBP11.86□□□□□ -0.51
DYSF-202ENST00000394120 SUMF1Q8NBK3 374 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 GAB2Q9UQC2 676 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 ADAMTSL3P82987 1691 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 CEBPZOSA8MTT3 80 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 IRF3Q14653 427 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 SHEQ5VZ18 495 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 CPEB2Q7Z5Q1 589 aaKnown RBP11.86□□□□□ -0.51
DYSF-202ENST00000394120 ARIH2OSQ8N7S6 290 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 BARHL1Q9BZE3 327 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 MBNL1Q9NR56 388 aaKnown RBP11.86□□□□□ -0.51
DYSF-202ENST00000394120 KCNE3Q9Y6H6 103 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 PCBP3P57721 371 aaKnown RBP11.86□□□□□ -0.51
DYSF-202ENST00000394120 PCBD1P61457 104 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 EEF1A1P68104 462 aaKnown RBP11.86□□□□□ -0.51
DYSF-202ENST00000394120 ZNF79Q15937 498 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 FAM78AQ5JUQ0 283 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 SFRP5Q5T4F7 317 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 MARCH3Q86UD3 253 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 PSMF1Q92530 271 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 RHOFQ9HBH0 211 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 ZNF346Q9UL40 294 aaKnown RBP11.86□□□□□ -0.51
DYSF-202ENST00000394120 STRAPQ9Y3F4 350 aaKnown RBP11.86□□□□□ -0.51
DYSF-202ENST00000394120 MYH14Q7Z406 1995 aaKnown RBP11.86□□□□□ -0.51
DYSF-202ENST00000394120 ZNF724A8MTY0 619 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 DFFBO76075 338 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 CSF2RBP32927 897 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 HRH1P35367 487 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 SELENOVP59797 346 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 YPEL5P62699 121 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 GUCA2AQ02747 115 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 ATPAF1Q5TC12 328 aaPredicted RBP11.86□□□□□ -0.51
DYSF-202ENST00000394120 AADACL3Q5VUY0 350 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 HSD17B13Q7Z5P4 300 aaPredicted RBP11.86□□□□□ -0.51
DYSF-202ENST00000394120 BPIFCQ8NFQ6 507 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 MARCH1Q8TCQ1 289 aa11.86□□□□□ -0.51
DYSF-202ENST00000394120 SEH1LQ96EE3 360 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms