RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 NOS3P29474 1203 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 APLNRP35414 380 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 WNT5AP41221 380 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 ALDH3B1P43353 468 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 CBX1P83916 185 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 GLO1Q04760 184 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 PLP2Q04941 152 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 RAB35Q15286 201 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 EFNB3Q15768 340 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 CARTPTQ16568 116 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 TBC1D28Q2M2D7 210 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 NRN1LQ496H8 165 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 SPATA46Q5T0L3 261 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 GPR139Q6DWJ6 353 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 LYPD4Q6UWN0 246 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 RFPL4BQ6ZWI9 263 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 ADCK1Q86TW2 530 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 JAZF1Q86VZ6 243 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 AQP12AQ8IXF9 295 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 ZNF101Q8IZC7 436 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 IQCF1Q8N6M8 205 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 CYB561A3Q8NBI2 242 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 IL17RDQ8NFM7 739 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 OR52E2Q8NGJ4 325 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 OR4Q3Q8NH05 313 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 ZNRF4Q8WWF5 429 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 C11orf40Q8WZ69 217 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 SLC7A6Q92536 515 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 GTF3AQ92664 365 aaKnown RBP6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 C18orf12Q96KH6 178 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 COX4I2Q96KJ9 171 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 GRIP2Q9C0E4 1043 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 KCNN2Q9H2S1 579 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 ZNF442Q9H7R0 627 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 SRA1Q9HD15 236 aaKnown RBP6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 RPRD1BQ9NQG5 326 aaKnown RBP6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 TBC1D23Q9NUY8 699 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 DUSP13Q9UII6 198 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 ZFHX3Q15911 3703 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 DSCAMO60469 2012 aa6.6□□□□□ -1.35
HMGB3P1-201ENST00000393368 IGLV1-36A0A0B4J1U3 117 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 LYNX1G3V0Z9 82 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 BHLHE40O14503 412 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 GNGT2O14610 69 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 DOK2O60496 412 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 ENTPD5O75356 428 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 E2F6O75461 281 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 TIPRLO75663 272 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 LY6G6DO95868 133 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 LYNX1P0DP58 116 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 GAAP10253 952 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 NAT2P11245 290 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 PSKH1P11801 424 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 APEHP13798 732 aaKnown RBP6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 PRKACGP22612 351 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 PYCR1P32322 319 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 GLRXP35754 106 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 RPS27P42677 84 aaKnown RBP6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 GUCA1AP43080 201 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 GDI2P50395 445 aaKnown RBP6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 HNRNPA0Q13151 305 aaKnown RBP6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 CCNIQ14094 377 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 TMEM255AQ5JRV8 349 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 CORO6Q6QEF8 472 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 DNM1P46Q6ZS02 220 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 RASSF6Q6ZTQ3 369 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 DPPA2Q7Z7J5 298 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 GLB1L2Q8IW92 636 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 OR6V1Q8N148 313 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 OR52L1Q8NGH7 329 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 OR51L1Q8NGJ5 315 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 OR9Q1Q8NGQ5 310 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 OR1J1Q8NGS3 322 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 ABHD4Q8TB40 342 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 FNDC8Q8TC99 324 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 MRPL24Q96A35 216 aaKnown RBP6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 POM121L2Q96KW2 1035 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 FEVQ99581 238 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 DOK1Q99704 481 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 BDH2Q9BUT1 245 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 TSSK6Q9BXA6 273 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 LRMDAQ9H2I8 198 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 POFUT1Q9H488 388 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 BARX1Q9HBU1 254 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 DYNLRB1Q9NP97 96 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 PDP1Q9P0J1 537 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 ASH2LQ9UBL3 628 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 FBXL3Q9UKT7 428 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 B9D1Q9UPM9 204 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 CMAHPQ9Y471 501 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 SPEF1Q9Y4P9 236 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 TIMM10BQ9Y5J6 103 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 PMF1-BGLAPU3KQ54 211 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 ALPK2Q86TB3 2170 aa6.59□□□□□ -1.35
HMGB3P1-201ENST00000393368 USF3Q68DE3 2245 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 A0A1W2PPW3 197 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 TVP23AA6NH52 213 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 C12orf71A8MTZ7 269 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 ARPC3O15145 178 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms