RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 ILKQ13418 452 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 DGCR6Q14129 220 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 KARSQ15046 597 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 CDK10Q15131 360 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 PON2Q15165 354 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 PON3Q15166 354 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 SPHARQ15513 63 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 TNXAQ16473 311 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 STX1AQ16623 288 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 Q1T7F1 81 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 DEFB109BQ30KR1 87 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 PLPPR5Q32ZL2 321 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 NSUN5P1Q3KNT7 163 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 PTPN20Q4JDL3 420 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 EPC2Q52LR7 807 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 TRMT12Q53H54 448 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 CYBRD1Q53TN4 286 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 FAM133BQ5BKY9 247 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 TTMPQ5BVD1 217 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 CT45A2Q5DJT8 189 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 SAMD4BQ5PRF9 694 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 PLEKHS1Q5SXH7 462 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 ZNF678Q5SXM1 525 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 BEND3Q5T5X7 828 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 AVPI1Q5T686 147 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 C9orf135Q5VTT2 229 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 SLX4IPQ5VYV7 408 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 METTL21CQ5VZV1 264 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 OR8G2PQ6IF36 304 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 CENPPQ6IPU0 288 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 FAM71F2Q6NXP2 309 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 JMJD6Q6NYC1 403 aaPredicted RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 LEG1Q6P5S2 330 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 SYT10Q6XYQ8 523 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 HACD2Q6Y1H2 254 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 Q6ZN92 141 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 LINC00696Q6ZRV3 163 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 CLEC17AQ6ZS10 378 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 RGS9BPQ6ZS82 235 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 LINC00173Q6ZV60 143 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 BNIPLQ7Z465 357 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 HDDC2Q7Z4H3 204 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 CDR2LQ86X02 465 aaPredicted RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 TICAM2Q86XR7 235 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 ANGPTL5Q86XS5 388 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 DIS3L2Q8IYB7 885 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 Q8N814 137 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 C12orf29Q8N999 325 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 ZFP62Q8NB50 900 aaPredicted RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 MINDY2Q8NBR6 621 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 C11orf72Q8NBR9 251 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 MSANTD4Q8NCY6 345 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 ZNF738Q8NE65 137 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 MCUQ8NE86 351 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 VN1R2Q8NFZ6 395 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 OR1M1Q8NGA1 313 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 OR4M1Q8NGD0 313 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 OR4D6Q8NGJ1 314 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 OR5D13Q8NGL4 314 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 SPATA18Q8TC71 538 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 PIFOQ8TCI5 191 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 LKAAEAR1Q8TD35 194 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 PAQR8Q8TEZ7 354 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 MAIP1Q8WWC4 291 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 ST8SIA1Q92185 356 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 DLX4Q92988 240 aaPredicted RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 NTAN1Q96AB6 310 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 APOBEC3DQ96AK3 386 aaPredicted RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 EVI5LQ96CN4 794 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 ZMYND19Q96E35 227 aaPredicted RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 RSRC1Q96IZ7 334 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 CCDC138Q96M89 665 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 Q96NJ1 140 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 SPRR2FQ96RM1 72 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 CNN2Q99439 309 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 TSNAXQ99598 290 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 GPR21Q99679 349 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 AGPAT1Q99943 283 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 APOOQ9BUR5 198 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 GGTLC1Q9BX51 225 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 LRRC2Q9BYS8 371 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 NLNQ9BYT8 704 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 OR10A4Q9H209 315 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 DCSTAMPQ9H295 470 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 PDCL3Q9H2J4 239 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 DPH5Q9H2P9 285 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 CST9LQ9H4G1 147 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 ZNF385DQ9H6B1 395 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 LRRC40Q9H9A6 602 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 PREBQ9HCU5 417 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 PCDHB16Q9NRJ7 776 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 CISHQ9NSE2 258 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 TAS2R10Q9NYW0 307 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 ERVK-18Q9QC07 812 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 XCL2Q9UBD3 114 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 MORF4L1Q9UBU8 362 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 TEKT2Q9UIF3 430 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 MRTO4Q9UKD2 239 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 VPREB3Q9UKI3 123 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 ADAM28Q9UKQ2 775 aa-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms