RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 SLC7A6Q92536 515 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 SEH1LQ96EE3 360 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 NAA50Q9GZZ1 169 aaKnown RBP5.39□□□□□ -1.55
RFX3-204ENST00000382004 GAREM1Q9H706 876 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 TMEM200CA6NKL6 621 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 FAM166BA8MTA8 275 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 H3BVH4 76 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 GPR31O00270 319 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 PHOX2AO14813 284 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 SMAD6O43541 496 aaKnown RBP5.39□□□□□ -1.55
RFX3-204ENST00000382004 GUSBP08236 651 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 CYBAP13498 195 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 FGF7P21781 194 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 HCCSP53701 268 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 SOX4Q06945 474 aaPredicted RBP5.39□□□□□ -1.55
RFX3-204ENST00000382004 TIPARPQ7Z3E1 657 aaKnown RBP5.39□□□□□ -1.55
RFX3-204ENST00000382004 BCDIN3DQ7Z5W3 292 aaKnown RBP5.39□□□□□ -1.55
RFX3-204ENST00000382004 RNF113BQ8IZP6 322 aaKnown RBP5.39□□□□□ -1.55
RFX3-204ENST00000382004 GJC3Q8NFK1 279 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 DTD1Q8TEA8 209 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 SLC39A7Q92504 469 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 SMIM7Q9BQ49 75 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 CHST6Q9GZX3 395 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 PIGMQ9H3S5 423 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 ACSS1Q9NUB1 689 aaPredicted RBP5.39□□□□□ -1.55
RFX3-204ENST00000382004 KLK4Q9Y5K2 254 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 FLVCR1Q9Y5Y0 555 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 SLCO1B1Q9Y6L6 691 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 A0A1W2PPQ1 181 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 WDR1O75083 606 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 IGHEP01854 428 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 TTRP02766 147 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 MBOAT2Q6ZWT7 520 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 LHX4Q969G2 390 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 C11orf54Q9H0W9 315 aaPredicted RBP5.39□□□□□ -1.55
RFX3-204ENST00000382004 RBFOX1Q9NWB1 397 aaKnown RBP5.39□□□□□ -1.55
RFX3-204ENST00000382004 B3GALT5Q9Y2C3 310 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 ABCC6O95255 1503 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 MEIKINA0A087WXM9 373 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 FITM1A5D6W6 292 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 ST8SIA3O43173 380 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 GLCEO94923 617 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 UBL3O95164 117 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 SLC6A11P48066 632 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 RFX2P48378 723 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 TPPP2P59282 170 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 PMP22Q01453 160 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 TAGLNQ01995 201 aaKnown RBP5.39□□□□□ -1.55
RFX3-204ENST00000382004 TNFRSF17Q02223 184 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 ETFDHQ16134 617 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 DGAT2L6Q6ZPD8 337 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 MISPQ8IVT2 679 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 ZNF511Q8NB15 262 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 OR5A2Q8NGI9 324 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 GOT1L1Q8NHS2 421 aaPredicted RBP5.39□□□□□ -1.55
RFX3-204ENST00000382004 COMMD5Q9GZQ3 224 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 HSD3B7Q9H2F3 369 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 PRSS21Q9Y6M0 314 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 TRAV34A0A0B4J273 112 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 SOCS7O14512 581 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 FGF4P08620 206 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 NQO2P16083 231 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 ADRA2CP18825 462 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 TACR1P25103 407 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 RAB38P57729 211 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 CTBSQ01459 385 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 RNASEKQ6P5S7 137 aaKnown RBP5.39□□□□□ -1.55
RFX3-204ENST00000382004 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 MED25Q71SY5 747 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 ARHGEF39Q8N4T4 335 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 RHOXF1Q8NHV9 184 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 ACY3Q96HD9 319 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 ZNF2Q9BSG1 426 aaPredicted RBP5.39□□□□□ -1.55
RFX3-204ENST00000382004 MSL2Q9HCI7 577 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 ASH2LQ9UBL3 628 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 CTSFQ9UBX1 484 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 KCNG2Q9UJ96 466 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 MST1RQ04912 1400 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 RNASEK-C17orf49H0YIS7 233 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 KLRC4-KLRK1H3BQV0 150 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 OR5AL1P0C617 328 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 EN2P19622 333 aaPredicted RBP5.39□□□□□ -1.55
RFX3-204ENST00000382004 CD68P34810 354 aaPredicted RBP5.39□□□□□ -1.55
RFX3-204ENST00000382004 MTNR1BP49286 362 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 ZNF140P52738 457 aaPredicted RBP5.39□□□□□ -1.55
RFX3-204ENST00000382004 SLC17A1Q14916 467 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 NCR3LG1Q68D85 454 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 MARCH3Q86UD3 253 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 NKAIN3Q8N8D7 197 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 MDGA1Q8NFP4 955 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 TMEM255BQ8WV15 326 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 TRAPPC4Q9Y296 219 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 ASCC3Q8N3C0 2202 aaKnown RBP5.39□□□□□ -1.55
RFX3-204ENST00000382004 ZNF354AO60765 605 aaPredicted RBP5.39□□□□□ -1.55
RFX3-204ENST00000382004 HSBP1O75506 76 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 SNAI1O95863 264 aaPredicted RBP5.39□□□□□ -1.55
RFX3-204ENST00000382004 CA3P07451 260 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 ADRB1P08588 477 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 SLC10A3P09131 477 aa5.39□□□□□ -1.55
RFX3-204ENST00000382004 CR2P20023 1033 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms