RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 CCL27Q9Y4X3 112 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 SLC22A23A1A5C7 686 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 CPSF4LA6NMK7 179 aaKnown RBP5.24□□□□□ -1.57
RFC1-202ENST00000381897 MCRIP1C9JLW8 97 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 FOXE1O00358 373 aaPredicted RBP5.24□□□□□ -1.57
RFC1-202ENST00000381897 CDC14BO60729 498 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 NXPH2O95156 264 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 PDGFBP01127 241 aaPredicted RBP5.24□□□□□ -1.57
RFC1-202ENST00000381897 TYMSP04818 313 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 ACP5P13686 325 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 CCR8P51685 355 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 NCBP2P52298 156 aaKnown RBP eCLIP5.24□□□□□ -1.57
RFC1-202ENST00000381897 BATFQ16520 125 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 DHRS7BQ6IAN0 325 aaPredicted RBP5.24□□□□□ -1.57
RFC1-202ENST00000381897 NDUFAF7Q7L592 441 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 EIF4E3Q8N5X7 224 aaKnown RBP5.24□□□□□ -1.57
RFC1-202ENST00000381897 OR4F15Q8NGB8 312 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 PHOSPHO2Q8TCD6 241 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 NEK7Q8TDX7 302 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 PNPLA2Q96AD5 504 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 KLHDC7BQ96G42 594 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 SEC22CQ9BRL7 303 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 TINAGL1Q9GZM7 467 aaPredicted RBP5.24□□□□□ -1.57
RFC1-202ENST00000381897 PITHD1Q9GZP4 211 aaPredicted RBP5.24□□□□□ -1.57
RFC1-202ENST00000381897 BARX1Q9HBU1 254 aaPredicted RBP5.24□□□□□ -1.57
RFC1-202ENST00000381897 HRASLSQ9HDD0 168 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 NRIP3Q9NQ35 241 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 ACSS1Q9NUB1 689 aaPredicted RBP5.24□□□□□ -1.57
RFC1-202ENST00000381897 KLHL13Q9P2N7 655 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 ST6GALNAC2Q9UJ37 374 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 FZR1Q9UM11 496 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 YARS2Q9Y2Z4 477 aaKnown RBP5.24□□□□□ -1.57
RFC1-202ENST00000381897 LAMA2P24043 3122 aaKnown RBP5.24□□□□□ -1.57
RFC1-202ENST00000381897 ANKRD12Q6UB98 2062 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 A0A0D9SEW6 157 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 SLC22A20A6NK97 555 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 H0Y980 276 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 P2RX6O15547 441 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 COCHO43405 550 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 STK17BO94768 372 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 CLDN7O95471 211 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 TK1P04183 234 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 FGF2P09038 288 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 DTYMKP23919 212 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 SHC1P29353 583 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 DGCR2P98153 550 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 TIAL1Q01085 375 aaKnown RBP eCLIP5.24□□□□□ -1.57
RFC1-202ENST00000381897 SLAQ13239 276 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 SLC14A1Q13336 389 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 TMEM41BQ5BJD5 291 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 ENTPD8Q5MY95 495 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.24□□□□□ -1.57
RFC1-202ENST00000381897 LIMS2Q7Z4I7 341 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 SCD5Q86SK9 330 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 CPOQ8IVL8 374 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 FAM24BQ8N5W8 94 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 ZNF614Q8N883 585 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 TERB2Q8NHR7 220 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 DUSP19Q8WTR2 217 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 TSEN15Q8WW01 171 aaKnown RBP5.24□□□□□ -1.57
RFC1-202ENST00000381897 SMARCD2Q92925 531 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 MIB2Q96AX9 1013 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 FAM46AQ96IP4 442 aaKnown RBP5.24□□□□□ -1.57
RFC1-202ENST00000381897 CNN2Q99439 309 aaKnown RBP5.24□□□□□ -1.57
RFC1-202ENST00000381897 IL21RQ9HBE5 538 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 RETNQ9HD89 108 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 CHST11Q9NPF2 352 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 TUBG2Q9NRH3 451 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 MRPS18AQ9NVS2 196 aaKnown RBP5.24□□□□□ -1.57
RFC1-202ENST00000381897 MIOXQ9UGB7 285 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 URGCP-MRPS24S4R325 110 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 TRAV1-2A0A0B4J238 106 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 A8MXK9 166 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 CHST1O43916 411 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 OR12D1P0DN82 309 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 GABRA1P14867 456 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 GNRHRP30968 328 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 CD96P40200 585 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 SLC5A12Q1EHB4 618 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 DGAT2L7PQ6IED9 249 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 IL34Q6ZMJ4 242 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 FJX1Q86VR8 437 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 KDF1Q8NAX2 398 aaPredicted RBP5.24□□□□□ -1.57
RFC1-202ENST00000381897 STEAP2Q8NFT2 490 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 OR6K3Q8NGY3 331 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 SYNPRQ8TBG9 265 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 WDR20Q8TBZ3 569 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 SLC2A12Q8TD20 617 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 RAB1CQ92928 201 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 NEURL3Q96EH8 262 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 MS4A10Q96PG2 267 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 MCHR1Q99705 422 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 MACROD1Q9BQ69 325 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 C16orf70Q9BSU1 422 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 C1QTNF2Q9BXJ5 285 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 TXNRD2Q9NNW7 524 aa5.24□□□□□ -1.57
RFC1-202ENST00000381897 PHIPQ8WWQ0 1821 aa5.23□□□□□ -1.57
RFC1-202ENST00000381897 ELOA3DA6NLF2 546 aaPredicted RBP5.23□□□□□ -1.57
RFC1-202ENST00000381897 M0R296 226 aa5.23□□□□□ -1.57
RFC1-202ENST00000381897 SIAH2O43255 324 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms