RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 NGBQ9NPG2 151 aa13.48□□□□□ -0.25
PDGFB-202ENST00000381551 NPAP1Q9NZP6 1156 aa13.48□□□□□ -0.25
PDGFB-202ENST00000381551 H2AFY2Q9P0M6 372 aaPredicted RBP13.48□□□□□ -0.25
PDGFB-202ENST00000381551 CRNNQ9UBG3 495 aaPredicted RBP13.48□□□□□ -0.25
PDGFB-202ENST00000381551 ANKHD1Q8IWZ3 2542 aaKnown RBP13.48□□□□□ -0.25
PDGFB-202ENST00000381551 CLIC3O95833 236 aa13.47□□□□□ -0.25
PDGFB-202ENST00000381551 IGKV3-15P01624 115 aa13.47□□□□□ -0.25
PDGFB-202ENST00000381551 COX6B1P14854 86 aa13.47□□□□□ -0.25
PDGFB-202ENST00000381551 ZNF823P16415 610 aa13.47□□□□□ -0.25
PDGFB-202ENST00000381551 ZNF32P17041 273 aa13.47□□□□□ -0.25
PDGFB-202ENST00000381551 GSTT1P30711 240 aa13.47□□□□□ -0.25
PDGFB-202ENST00000381551 CAPGP40121 348 aa13.47□□□□□ -0.25
PDGFB-202ENST00000381551 ZNF83P51522 516 aa13.47□□□□□ -0.25
PDGFB-202ENST00000381551 AQP4P55087 323 aa13.47□□□□□ -0.25
PDGFB-202ENST00000381551 APOFQ13790 326 aa13.47□□□□□ -0.25
PDGFB-202ENST00000381551 OCLNQ16625 522 aa13.47□□□□□ -0.25
PDGFB-202ENST00000381551 ZNF691Q5VV52 312 aa13.47□□□□□ -0.25
PDGFB-202ENST00000381551 B3GLCTQ6Y288 498 aa13.47□□□□□ -0.25
PDGFB-202ENST00000381551 MEPCEQ7L2J0 689 aaKnown RBP13.47□□□□□ -0.25
PDGFB-202ENST00000381551 ENTHD1Q8IYW4 607 aa13.47□□□□□ -0.25
PDGFB-202ENST00000381551 ZMYND19Q96E35 227 aaPredicted RBP13.47□□□□□ -0.25
PDGFB-202ENST00000381551 APOL4Q9BPW4 351 aa13.47□□□□□ -0.25
PDGFB-202ENST00000381551 RNF121Q9H920 327 aa13.47□□□□□ -0.25
PDGFB-202ENST00000381551 MARCH7Q9H992 704 aa13.47□□□□□ -0.25
PDGFB-202ENST00000381551 MOV10Q9HCE1 1003 aaKnown RBP13.47□□□□□ -0.25
PDGFB-202ENST00000381551 RASSF1Q9NS23 344 aa13.47□□□□□ -0.25
PDGFB-202ENST00000381551 AASSQ9UDR5 926 aa13.47□□□□□ -0.25
PDGFB-202ENST00000381551 TIMM10BQ9Y5J6 103 aa13.47□□□□□ -0.25
PDGFB-202ENST00000381551 PKDREJQ9NTG1 2253 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 CCDC182A6NF36 153 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 DPRXA6NFQ7 191 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 DEFB108AA8MXU0 73 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 ZNF593O00488 134 aaPredicted RBP13.46□□□□□ -0.25
PDGFB-202ENST00000381551 SIAH2O43255 324 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 MPZL2O60487 215 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 IGLV1-44P01699 117 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 VHLP40337 213 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 ISL1P61371 349 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 PCBD1P61457 104 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 HIST1H3AP68431 136 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 PSG4Q00888 419 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 IL18R1Q13478 541 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 PCK2Q16822 640 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 C3orf36Q3SXR2 165 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 TEX30Q5JUR7 227 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 HIST2H3PS2Q5TEC6 136 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 MEDAGQ5VYS4 303 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 TMEM53Q6P2H8 277 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 HIST2H3AQ71DI3 136 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.46□□□□□ -0.25
PDGFB-202ENST00000381551 OR10H5Q8NGA6 315 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 ZNF582Q96NG8 517 aaPredicted RBP13.46□□□□□ -0.25
PDGFB-202ENST00000381551 CDADC1Q9BWV3 514 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 OR2H1Q9GZK4 316 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 CCNB1IP1Q9NPC3 277 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 ASH2LQ9UBL3 628 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 CYB5R1Q9UHQ9 305 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 KCNG2Q9UJ96 466 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 LHFPL6Q9Y693 200 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 COMMD3-BMI1R4GMX3 469 aa13.46□□□□□ -0.25
PDGFB-202ENST00000381551 IGHV1-18A0A0C4DH31 117 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 FAM221AA4D161 298 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 SLC22A31A6NKX4 558 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 M0R1B8 84 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 ENTPD6O75354 484 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 RAB36O95755 333 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 SERPINA5P05154 406 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 CELA3BP08861 270 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 GNAO1P09471 354 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 ZNF14P17017 642 aaPredicted RBP13.45□□□□□ -0.26
PDGFB-202ENST00000381551 ENTPD1P49961 510 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 RPS7P62081 194 aaKnown RBP13.45□□□□□ -0.26
PDGFB-202ENST00000381551 ADAM8P78325 824 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 AQP6Q13520 282 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 RAB39AQ14964 217 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 BEX5Q5H9J7 111 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 PABPC1L2AQ5JQF8 200 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 NCMAPQ5T1S8 102 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 C6orf52Q5T4I8 152 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 IZUMO2Q6UXV1 221 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 USP51Q70EK9 711 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 ZNF584Q8IVC4 421 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 GID4Q8IVV7 300 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 TIGD4Q8IY51 512 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 ZNF295-AS1Q8N0V1 137 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 CPEB3Q8NE35 698 aaKnown RBP13.45□□□□□ -0.26
PDGFB-202ENST00000381551 GJC3Q8NFK1 279 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 RASSF4Q9H2L5 321 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 HAO2Q9NYQ3 351 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 DNAJC27Q9NZQ0 273 aa13.45□□□□□ -0.26
PDGFB-202ENST00000381551 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.44□□□□□ -0.26
PDGFB-202ENST00000381551 A6NNC1 897 aa13.44□□□□□ -0.26
PDGFB-202ENST00000381551 RER1O15258 196 aa13.44□□□□□ -0.26
PDGFB-202ENST00000381551 TMCC2O75069 709 aa13.44□□□□□ -0.26
PDGFB-202ENST00000381551 PSKH1P11801 424 aa13.44□□□□□ -0.26
PDGFB-202ENST00000381551 PTAFRP25105 342 aa13.44□□□□□ -0.26
PDGFB-202ENST00000381551 CD40P25942 277 aa13.44□□□□□ -0.26
PDGFB-202ENST00000381551 LOXP28300 417 aaPredicted RBP13.44□□□□□ -0.26
PDGFB-202ENST00000381551 HTR1FP30939 366 aa13.44□□□□□ -0.26
PDGFB-202ENST00000381551 RPS27P42677 84 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms