RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 NUDT11Q96G61 164 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 SLC2A13Q96QE2 648 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 GINS3Q9BRX5 216 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 HDAC8Q9BY41 377 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 SLC23A2Q9UGH3 650 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 WASHC3Q9Y3C0 194 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 RICTORQ6R327 1708 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 LOC390937A0A1W2PQ73 354 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 CLDN34H7C241 214 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 MRPL33O75394 65 aaKnown RBP9.93□□□□□ -0.82
CLCN4-202ENST00000380833 YIF1AO95070 293 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 HBQ1P09105 142 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 RFX2P48378 723 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 VASPP50552 380 aaPredicted RBP9.93□□□□□ -0.82
CLCN4-202ENST00000380833 PRPS1P60891 318 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 C2CD4AQ8NCU7 369 aaPredicted RBP9.93□□□□□ -0.82
CLCN4-202ENST00000380833 SIX2Q9NPC8 291 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 IER3IP1Q9Y5U9 82 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 HEXAP06865 529 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 GSTP1P09211 210 aaKnown RBP9.93□□□□□ -0.82
CLCN4-202ENST00000380833 PDE7AQ13946 482 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 FCRLAQ7L513 359 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 APIPQ96GX9 242 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 SEC11CQ9BY50 192 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 RAB22AQ9UL26 194 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 TGIF2-C20orf24A0A0A6YYL0 155 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 HOXA11P31270 313 aaPredicted RBP9.93□□□□□ -0.82
CLCN4-202ENST00000380833 PPP2CAP67775 309 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 DTWD1Q8N5C7 304 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 SIRT6Q8N6T7 355 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 OR52E1Q8NGJ3 308 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 TMEM19Q96HH6 336 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 TSSK2Q96PF2 358 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 SMIM7Q9BQ49 75 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 GORASP2Q9H8Y8 452 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.93□□□□□ -0.82
CLCN4-202ENST00000380833 A0A0B4J293 547 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 GCGP01275 180 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 HTR5AP47898 357 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 SUCLG1P53597 346 aaKnown RBP9.93□□□□□ -0.82
CLCN4-202ENST00000380833 FUT2Q10981 343 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 PDLIM3Q53GG5 364 aaPredicted RBP9.93□□□□□ -0.82
CLCN4-202ENST00000380833 FUNDC1Q8IVP5 155 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 DND1Q8IYX4 353 aaKnown RBP9.93□□□□□ -0.82
CLCN4-202ENST00000380833 OR5B3Q8NH48 314 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 PPP1R35Q8TAP8 253 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 UBTD2Q8WUN7 234 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 MS4A3Q96HJ5 214 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 DMRTA2Q96SC8 542 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 CTDSP1Q9GZU7 261 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 GHITMQ9H3K2 345 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 CLMPQ9H6B4 373 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 TRAPPC4Q9Y296 219 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 TRGV8A0A0C4DH27 118 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 PRAMEF26H0Y7S4 382 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 PTHP01270 115 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 PRF1P14222 555 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 GALR1P47211 349 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 CLDN17P56750 224 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 TMEM267Q0VDI3 215 aaPredicted RBP9.93□□□□□ -0.82
CLCN4-202ENST00000380833 NSUN5P2Q63ZY6 315 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 LILRA2Q8N149 483 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 OR5AP2Q8NGF4 316 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 STARD4Q96DR4 205 aa9.93□□□□□ -0.82
CLCN4-202ENST00000380833 UTP23Q9BRU9 249 aaKnown RBP9.93□□□□□ -0.82
CLCN4-202ENST00000380833 AIFM1O95831 613 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 F13BP05160 661 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 SLC10A3P09131 477 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 ACP2P11117 423 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 NDUFB7P17568 137 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 CLLU1OSQ5K130 101 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 OR9Q2Q8NGE9 314 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 C19orf43Q9BQ61 176 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 ZNF2Q9BSG1 426 aaPredicted RBP9.92□□□□□ -0.82
CLCN4-202ENST00000380833 HMX2A2RU54 273 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 ANKRD61A6NGH8 418 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 SLC16A6O15403 523 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 GPR32O75388 356 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 SNRPBP14678 240 aaKnown RBP9.92□□□□□ -0.82
CLCN4-202ENST00000380833 KCNE1P15382 129 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 CD38P28907 300 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 TACR3P29371 465 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 AHRP35869 848 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 TMEM176BQ3YBM2 270 aaPredicted RBP9.92□□□□□ -0.82
CLCN4-202ENST00000380833 MSI2Q96DH6 328 aaKnown RBP9.92□□□□□ -0.82
CLCN4-202ENST00000380833 DCAF13Q9NV06 445 aaKnown RBP9.92□□□□□ -0.82
CLCN4-202ENST00000380833 SOX21Q9Y651 276 aaPredicted RBP9.92□□□□□ -0.82
CLCN4-202ENST00000380833 A0A1W2PN81 502 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 PRSS38A1L453 326 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 SMAD6O43541 496 aaKnown RBP9.92□□□□□ -0.82
CLCN4-202ENST00000380833 ALDOAP04075 364 aaKnown RBP9.92□□□□□ -0.82
CLCN4-202ENST00000380833 DRD1P21728 446 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 IL2RGP31785 369 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 CHRNA7P36544 502 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 LIPAP38571 399 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 CD300CQ08708 224 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 TMEM123Q8N131 208 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 GPR148Q8TDV2 347 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 C1orf74Q96LT6 269 aa9.92□□□□□ -0.82
CLCN4-202ENST00000380833 CSNK1G1Q9HCP0 422 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms