RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 FAM160A2Q8N612 972 aaPredicted RBP11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 OR51S1Q8NGJ8 323 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 C16orf52Q8NHV5 167 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 C3orf49Q96BT1 292 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 C14orf79Q96F83 325 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 SEC22AQ96IW7 307 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 NAA11Q9BSU3 229 aaPredicted RBP11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 KLF15Q9UIH9 416 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 ZNF281Q9Y2X9 895 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 PRRC2CQ9Y520 2896 aaKnown RBP11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 TRAV14DV4A0A0A6YYC5 116 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 KANTRA0A1W2PQU2 76 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 CCSO14618 274 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 RPA2P15927 270 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 MGAT2Q10469 447 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 SKP2Q13309 424 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 FHL1Q13642 323 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 C9orf50Q5SZB4 431 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 CDPF1Q6NVV7 123 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 PHOSPHO2Q8TCD6 241 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 THAP3Q8WTV1 239 aaPredicted RBP11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 CA5BP1Q8WTZ4 195 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 ZC3H10Q96K80 434 aaKnown RBP11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 SLITRK2Q9H156 845 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 ENTPD2Q9Y5L3 495 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 DOCK8Q8NF50 2099 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 COLCA2A8K830 154 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 UBE2CO00762 179 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 NDUFB6O95139 128 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 MUC1P15941 1255 aaPredicted RBP11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 OR1D4P47884 311 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 PNLIPRP2P54317 469 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 TAS2R20P59543 309 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 ACTA2P62736 377 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 ACTG2P63267 376 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 LTBQ06643 244 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 ALG10Q5BKT4 473 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 PWWP2BQ6NUJ5 590 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 MRPL38Q96DV4 380 aaKnown RBP11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 SEBOXQ9HB31 216 aaPredicted RBP11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 Q9N2J8 555 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 DZANK1Q9NVP4 752 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 FRRS1LQ9P0K9 344 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 CGGBP1Q9UFW8 167 aaPredicted RBP11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 KCNG2Q9UJ96 466 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 FBXO4Q9UKT5 387 aa11.28□□□□□ -0.6
PRPF40B-202ENST00000380281 ZNF729A6NN14 1252 aaPredicted RBP11.27□□□□□ -0.6
PRPF40B-202ENST00000380281 SNRPGP15A8MWD9 76 aa11.27□□□□□ -0.6
PRPF40B-202ENST00000380281 ITGA10O75578 1167 aa11.27□□□□□ -0.6
PRPF40B-202ENST00000380281 SPARCP09486 303 aa11.27□□□□□ -0.6
PRPF40B-202ENST00000380281 ABCD3P28288 659 aa11.27□□□□□ -0.6
PRPF40B-202ENST00000380281 AP3S2P59780 193 aa11.27□□□□□ -0.6
PRPF40B-202ENST00000380281 CEBPEQ15744 281 aa11.27□□□□□ -0.6
PRPF40B-202ENST00000380281 MED25Q71SY5 747 aa11.27□□□□□ -0.6
PRPF40B-202ENST00000380281 KTI12Q96EK9 354 aaPredicted RBP11.27□□□□□ -0.6
PRPF40B-202ENST00000380281 DGAT2Q96PD7 388 aa11.27□□□□□ -0.6
PRPF40B-202ENST00000380281 GRHPRQ9UBQ7 328 aa11.27□□□□□ -0.6
PRPF40B-202ENST00000380281 OR14I1A6ND48 311 aa11.27□□□□□ -0.61
PRPF40B-202ENST00000380281 HCRTR2O43614 444 aa11.27□□□□□ -0.61
PRPF40B-202ENST00000380281 PLRG1O43660 514 aaKnown RBP11.27□□□□□ -0.61
PRPF40B-202ENST00000380281 CDC40O60508 579 aaKnown RBP eCLIP11.27□□□□□ -0.61
PRPF40B-202ENST00000380281 RBBP9O75884 186 aa11.27□□□□□ -0.61
PRPF40B-202ENST00000380281 BIKQ13323 160 aa11.27□□□□□ -0.61
PRPF40B-202ENST00000380281 NFATC4Q14934 902 aa11.27□□□□□ -0.61
PRPF40B-202ENST00000380281 KIR2DS3Q14952 304 aa11.27□□□□□ -0.61
PRPF40B-202ENST00000380281 TOMM34Q15785 309 aaPredicted RBP11.27□□□□□ -0.61
PRPF40B-202ENST00000380281 ELFN2Q5R3F8 820 aa11.27□□□□□ -0.61
PRPF40B-202ENST00000380281 RPL13AP3Q6NVV1 102 aa11.27□□□□□ -0.61
PRPF40B-202ENST00000380281 SLC29A4Q7RTT9 530 aa11.27□□□□□ -0.61
PRPF40B-202ENST00000380281 MISPQ8IVT2 679 aa11.27□□□□□ -0.61
PRPF40B-202ENST00000380281 SP7Q8TDD2 431 aaPredicted RBP11.27□□□□□ -0.61
PRPF40B-202ENST00000380281 FAM46BQ96A09 425 aa11.27□□□□□ -0.61
PRPF40B-202ENST00000380281 MEGF10Q96KG7 1140 aa11.27□□□□□ -0.61
PRPF40B-202ENST00000380281 VRK1Q99986 396 aaPredicted RBP11.27□□□□□ -0.61
PRPF40B-202ENST00000380281 ATG5Q9H1Y0 275 aa11.27□□□□□ -0.61
PRPF40B-202ENST00000380281 EXO5Q9H790 373 aa11.27□□□□□ -0.61
PRPF40B-202ENST00000380281 PRTFDC1Q9NRG1 225 aa11.27□□□□□ -0.61
PRPF40B-202ENST00000380281 FITM1A5D6W6 292 aa11.26□□□□□ -0.61
PRPF40B-202ENST00000380281 GABARAPH6UMI1 98 aa11.26□□□□□ -0.61
PRPF40B-202ENST00000380281 OGG1O15527 345 aa11.26□□□□□ -0.61
PRPF40B-202ENST00000380281 CD3DP04234 171 aa11.26□□□□□ -0.61
PRPF40B-202ENST00000380281 NDUFB7P17568 137 aa11.26□□□□□ -0.61
PRPF40B-202ENST00000380281 GALP22466 123 aa11.26□□□□□ -0.61
PRPF40B-202ENST00000380281 ADH6P28332 368 aa11.26□□□□□ -0.61
PRPF40B-202ENST00000380281 KIR2DL1P43626 348 aaPredicted RBP11.26□□□□□ -0.61
PRPF40B-202ENST00000380281 HHEXQ03014 270 aa11.26□□□□□ -0.61
PRPF40B-202ENST00000380281 CCINQ13939 588 aa11.26□□□□□ -0.61
PRPF40B-202ENST00000380281 OR7A5Q15622 319 aa11.26□□□□□ -0.61
PRPF40B-202ENST00000380281 TRAM1Q15629 374 aa11.26□□□□□ -0.61
PRPF40B-202ENST00000380281 NCMAPQ5T1S8 102 aa11.26□□□□□ -0.61
PRPF40B-202ENST00000380281 JMJD6Q6NYC1 403 aaPredicted RBP11.26□□□□□ -0.61
PRPF40B-202ENST00000380281 SSX9Q7RTT3 188 aa11.26□□□□□ -0.61
PRPF40B-202ENST00000380281 MARCH3Q86UD3 253 aa11.26□□□□□ -0.61
PRPF40B-202ENST00000380281 OR4C16Q8NGL9 310 aa11.26□□□□□ -0.61
PRPF40B-202ENST00000380281 FLVCR1-AS1Q8TAF5 88 aa11.26□□□□□ -0.61
PRPF40B-202ENST00000380281 CLCC1Q96S66 551 aa11.26□□□□□ -0.61
PRPF40B-202ENST00000380281 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.26□□□□□ -0.61
PRPF40B-202ENST00000380281 MRM2Q9UI43 246 aaKnown RBP11.26□□□□□ -0.61
PRPF40B-202ENST00000380281 FOXJ3Q9UPW0 622 aa11.26□□□□□ -0.61
PRPF40B-202ENST00000380281 C2orf74A8MZ97 194 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms