RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 LIPT2A6NK58 231 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 ZNF823P16415 610 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 GIFP27352 417 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 GZMKP49863 264 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 HSF1Q00613 529 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 ETFDHQ16134 617 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 BCL2L15Q5TBC7 163 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 PRSS45Q7RTY3 260 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 IZUMO1Q8IYV9 350 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 ASCC1Q8N9N2 400 aaKnown RBP19.28■□□□□ 0.68
TRIM54-202ENST00000380075 ADPRHL1Q8NDY3 354 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 FCAMRQ8WWV6 532 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 PAQR5Q9NXK6 330 aaPredicted RBP19.28■□□□□ 0.68
TRIM54-202ENST00000380075 TRAV8-7A0A075B6U6 113 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 A0A0A6YYJ9 748 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 AQP8O94778 261 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 HRGP04196 525 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 HLA-DOBP13765 273 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 IFNGR1P15260 489 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 IL11P20809 199 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 PTGDSP41222 190 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 CLDN12P56749 244 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 PLPPR5Q32ZL2 321 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 RNASE12Q5GAN4 147 aaKnown RBP19.28■□□□□ 0.68
TRIM54-202ENST00000380075 TMEM53Q6P2H8 277 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 DEGS2Q6QHC5 323 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 SLC26A10Q8NG04 563 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 OR10AC1Q8NH08 325 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 PMEPA1Q969W9 287 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 DEFB126Q9BYW3 111 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 MED28Q9H204 178 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 GHITMQ9H3K2 345 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 SLA2Q9H6Q3 261 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 AUNIPQ9H7T9 357 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 APMAPQ9HDC9 416 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 PISDQ9UG56 409 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 PTPRBP23467 1997 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 ACOT7O00154 380 aa19.27■□□□□ 0.68
TRIM54-202ENST00000380075 KHDRBS3O75525 346 aaKnown RBP19.27■□□□□ 0.68
TRIM54-202ENST00000380075 MAS1P04201 325 aa19.27■□□□□ 0.68
TRIM54-202ENST00000380075 PTH2RP49190 550 aa19.27■□□□□ 0.68
TRIM54-202ENST00000380075 FAPQ12884 760 aa19.27■□□□□ 0.68
TRIM54-202ENST00000380075 FAM69BQ5VUD6 431 aa19.27■□□□□ 0.68
TRIM54-202ENST00000380075 CATSPERDQ86XM0 798 aa19.27■□□□□ 0.68
TRIM54-202ENST00000380075 BMPERQ8N8U9 685 aa19.27■□□□□ 0.68
TRIM54-202ENST00000380075 OR56B4Q8NH76 319 aa19.27■□□□□ 0.68
TRIM54-202ENST00000380075 DEDD2Q8WXF8 326 aa19.27■□□□□ 0.68
TRIM54-202ENST00000380075 C5orf34Q96MH7 638 aa19.27■□□□□ 0.68
TRIM54-202ENST00000380075 NPAS1Q99742 590 aa19.27■□□□□ 0.68
TRIM54-202ENST00000380075 EMC3Q9P0I2 261 aa19.27■□□□□ 0.68
TRIM54-202ENST00000380075 LOC102723996A0A087X1L8 192 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 FAM47E-STBD1D6RA91 191 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 OR2J2O76002 312 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 CD2P06729 351 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 FKBP2P26885 142 aaKnown RBP19.26■□□□□ 0.67
TRIM54-202ENST00000380075 STOMP27105 288 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 CAMK2BQ13554 666 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 CD276Q5ZPR3 534 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 PLCZ1Q86YW0 608 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 OR51A4Q8NGJ6 313 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 ZFAND1Q8TCF1 268 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 SPACA9Q96E40 222 aaPredicted RBP19.26■□□□□ 0.67
TRIM54-202ENST00000380075 GPN3Q9UHW5 284 aaPredicted RBP19.26■□□□□ 0.67
TRIM54-202ENST00000380075 RPH3AQ9Y2J0 694 aaPredicted RBP19.26■□□□□ 0.67
TRIM54-202ENST00000380075 LRP12Q9Y561 859 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 TRAV6A0A075B6T7 132 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 H2AFB2P0C5Z0 115 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 JMJD7P0C870 316 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 POU3F1Q03052 451 aaPredicted RBP19.26■□□□□ 0.67
TRIM54-202ENST00000380075 EIF3IQ13347 325 aaKnown RBP19.26■□□□□ 0.67
TRIM54-202ENST00000380075 TNK1Q13470 666 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 ELFN2Q5R3F8 820 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 LCN10Q6JVE6 187 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 OR52I2Q8NH67 350 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 ELP5Q8TE02 316 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 FOXN4Q96NZ1 517 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 ULBP3Q9BZM4 244 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 STMN3Q9NZ72 180 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 DHDHQ9UQ10 334 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 R4GMQ9 66 aa19.26■□□□□ 0.67
TRIM54-202ENST00000380075 FSTP19883 344 aa19.25■□□□□ 0.67
TRIM54-202ENST00000380075 CDK2P24941 298 aa19.25■□□□□ 0.67
TRIM54-202ENST00000380075 KIF26BQ2KJY2 2108 aa19.25■□□□□ 0.67
TRIM54-202ENST00000380075 OR7E24Q6IFN5 339 aa19.25■□□□□ 0.67
TRIM54-202ENST00000380075 C3orf33Q6P1S2 294 aa19.25■□□□□ 0.67
TRIM54-202ENST00000380075 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.25■□□□□ 0.67
TRIM54-202ENST00000380075 KDM8Q8N371 416 aa19.25■□□□□ 0.67
TRIM54-202ENST00000380075 OR10G3Q8NGC4 313 aa19.25■□□□□ 0.67
TRIM54-202ENST00000380075 TMEM246Q9BRR3 403 aa19.25■□□□□ 0.67
TRIM54-202ENST00000380075 SLC17A5Q9NRA2 495 aa19.25■□□□□ 0.67
TRIM54-202ENST00000380075 KLHL13Q9P2N7 655 aa19.25■□□□□ 0.67
TRIM54-202ENST00000380075 CKLFQ9UBR5 152 aa19.25■□□□□ 0.67
TRIM54-202ENST00000380075 FREM2Q5SZK8 3169 aa19.25■□□□□ 0.67
TRIM54-202ENST00000380075 PNPP00491 289 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 TAS2R20P59543 309 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 GPR85P60893 370 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 MC2RQ01718 297 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 SNTA1Q13424 505 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 DNM1P46Q6ZS02 220 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 HDDC2Q7Z4H3 204 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms