RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 GABRR1P24046 479 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 IFNGR2P38484 337 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 RPL29P47914 159 aaKnown RBP6.78□□□□□ -1.32
CDKL5-201ENST00000379989 PTSQ03393 145 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 ELAVL3Q14576 367 aaKnown RBP6.78□□□□□ -1.32
CDKL5-201ENST00000379989 MRM1Q6IN84 353 aaKnown RBP6.78□□□□□ -1.32
CDKL5-201ENST00000379989 NOXRED1Q6NXP6 359 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 SLC35E3Q7Z769 313 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 SIRT6Q8N6T7 355 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 C10orf53Q8N6V4 93 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 C17orf47Q8NEP4 570 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 OR5W2Q8NH69 310 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 THAP3Q8WTV1 239 aaPredicted RBP6.78□□□□□ -1.32
CDKL5-201ENST00000379989 Q8WTZ3 238 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 SMPDL3BQ92485 455 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 ZNF764Q96H86 408 aaPredicted RBP6.78□□□□□ -1.32
CDKL5-201ENST00000379989 SYT3Q9BQG1 590 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 G6PC3Q9BUM1 346 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 ELOVL1Q9BW60 279 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 RSPO3Q9BXY4 272 aaPredicted RBP6.78□□□□□ -1.32
CDKL5-201ENST00000379989 PCBD2Q9H0N5 130 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 OR2AG1Q9H205 316 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 C1orf198Q9H425 327 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 EGLN3Q9H6Z9 239 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 PLEKHA2Q9HB19 425 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 POMT1Q9Y6A1 747 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 TEX13DA0A0J9YY54 714 aaPredicted RBP6.78□□□□□ -1.32
CDKL5-201ENST00000379989 NKX6-3A6NJ46 265 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 NDUFS8O00217 210 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 NME6O75414 186 aaPredicted RBP6.78□□□□□ -1.32
CDKL5-201ENST00000379989 CLDN7O95471 211 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 MT-ND5P03915 603 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 OR8U9P0C7N5 309 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 PIRTP0C851 137 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 ACP5P13686 325 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 AMD1P17707 334 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 NOVA1P51513 510 aaKnown RBP6.78□□□□□ -1.32
CDKL5-201ENST00000379989 IDH3GP51553 393 aaPredicted RBP6.78□□□□□ -1.32
CDKL5-201ENST00000379989 PCBP3P57721 371 aaKnown RBP6.78□□□□□ -1.32
CDKL5-201ENST00000379989 RAB1AP62820 205 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 RPS15P62841 145 aaKnown RBP6.78□□□□□ -1.32
CDKL5-201ENST00000379989 RAB30Q15771 203 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 MOGAT2Q3SYC2 334 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 PRAMEF8Q5VWM4 474 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 PRAMEF7Q5VXH5 474 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 ZNF343Q6P1L6 599 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 FAM151BQ6UXP7 276 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 SSX7Q7RTT5 188 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 SYT12Q8IV01 421 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 LRRC56Q8IYG6 542 aaPredicted RBP6.78□□□□□ -1.32
CDKL5-201ENST00000379989 FAM160A2Q8N612 972 aaPredicted RBP6.78□□□□□ -1.32
CDKL5-201ENST00000379989 BBS1Q8NFJ9 593 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 OR4S1Q8NGB4 309 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 OR8U1Q8NH10 309 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 WFDC5Q8TCV5 224 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 WFDC12Q8WWY7 111 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 FRZBQ92765 325 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 SMARCD2Q92925 531 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 RRNAD1Q96FB5 475 aaKnown RBP6.78□□□□□ -1.32
CDKL5-201ENST00000379989 FCRL4Q96PJ5 515 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 LMF1Q96S06 567 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 TRIM2Q9C040 744 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 ZFP30Q9Y2G7 519 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 AK6Q9Y3D8 172 aaKnown RBP6.78□□□□□ -1.32
CDKL5-201ENST00000379989 WIF1Q9Y5W5 379 aa6.78□□□□□ -1.32
CDKL5-201ENST00000379989 NPIPB15A6NHN6 443 aaPredicted RBP6.77□□□□□ -1.33
CDKL5-201ENST00000379989 AMBPP02760 352 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 APODP05090 189 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 H1F0P07305 194 aaKnown RBP6.77□□□□□ -1.33
CDKL5-201ENST00000379989 ERCC1P07992 297 aaPredicted RBP6.77□□□□□ -1.33
CDKL5-201ENST00000379989 PGA3P0DJD8 388 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 AQP2P41181 271 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 NPY4RP50391 375 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 ACSM3Q53FZ2 586 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 STPG1Q5TH74 334 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 NXPE4Q6UWF7 544 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 GALNTL5Q7Z4T8 443 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 DCXRQ7Z4W1 244 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 KMT5CQ86Y97 462 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 RBM45Q8IUH3 476 aaKnown RBP6.77□□□□□ -1.33
CDKL5-201ENST00000379989 MAML2Q8IZL2 1156 aaPredicted RBP6.77□□□□□ -1.33
CDKL5-201ENST00000379989 ZNF619Q8N2I2 560 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 AMER3Q8N944 861 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 OR9A4Q8NGU2 314 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 OR4C6Q8NH72 309 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 TNFRSF14Q92956 283 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 SHDQ96IW2 340 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 POFUT1Q9H488 388 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 MYOTQ9UBF9 498 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 B4GALT6Q9UBX8 382 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 TCFL5Q9UL49 500 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 LOC100509620A0A075B734 347 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 IQCF5A8MTL0 148 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 UMAD1C9J7I0 102 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 H0YIV9 168 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 ACOT7O00154 380 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 CCL25O15444 150 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 CCL16O15467 120 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 FLRT2O43155 660 aa6.77□□□□□ -1.33
CDKL5-201ENST00000379989 PLPP2O43688 288 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms