RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 ARL6IP1Q15041 203 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 GLYATL3Q5SZD4 288 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 ALKAL2Q6UX46 152 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 ZNF679Q8IYX0 411 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 HAVCR1Q96D42 359 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 GPA33Q99795 319 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 ISYNA1Q9NPH2 558 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 FKBP14Q9NWM8 211 aa12.83□□□□□ -0.36
SHROOM1-203ENST00000378679 ZNF736B4DX44 427 aaPredicted RBP12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 SMIM10L1P0DMW3 83 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 HTR2CP28335 458 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 BDKRB2P30411 391 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 RBMXP38159 391 aaKnown RBP12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 ACER2Q5QJU3 275 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 AADACL4Q5VUY2 407 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 CFAP77Q6ZQR2 320 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 INO80EQ8NBZ0 244 aaPredicted RBP12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 MFSD8Q8NHS3 518 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 SMIM19Q96E16 107 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 SMIM10Q96HG1 83 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 PLEKHJ1Q9NW61 149 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 TAS2R3Q9NYW6 316 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 SLC22A13Q9Y226 551 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 OR6C68A6NDL8 312 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 SCGNO76038 276 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 MT-ND4P03905 459 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 UBCP0CG48 685 aaKnown RBP12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 HLA-DMAP28067 261 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 SLC10A1Q14973 349 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 TRIP6Q15654 476 aaKnown RBP12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 SMUG1Q53HV7 270 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 HES3Q5TGS1 186 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 ARSKQ6UWY0 536 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 LINC00299Q6ZSB3 139 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 IL17RDQ8NFM7 739 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 NUBPLQ8TB37 319 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 THAP6Q8TBB0 222 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 OXGR1Q96P68 337 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 LIN7BQ9HAP6 207 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 PLA2G3Q9NZ20 509 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 ABHD16AO95870 558 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 DBHP09172 617 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 CSF2RBP32927 897 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 ZNF136P52737 540 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 THEM4Q5T1C6 240 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 RAB12Q6IQ22 244 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 CSNK2A3Q8NEV1 391 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 HSD17B8Q92506 261 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 SLAMF6Q96DU3 332 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 SORCS2Q96PQ0 1159 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 RASL10BQ96S79 203 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 TREM1Q9NP99 234 aa12.82□□□□□ -0.36
SHROOM1-203ENST00000378679 ZNF587BE7ETH6 402 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 SERPINA2P20848 420 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 DNAAF1Q8NEP3 725 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 ORAI1Q96D31 301 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 WFDC6Q9BQY6 131 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 ZNF471Q9BX82 626 aaPredicted RBP12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 C12orf49Q9H741 205 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 SLC5A6Q9Y289 635 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 PI4KAP42356 2102 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 ATP6V1G2-DDX39BF2Z307 99 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 H7C2Y5 167 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 IGLV3-19P01714 112 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 MTCP1P56278 107 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 WIPI1Q5MNZ9 446 aaPredicted RBP12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 LSMEM1Q8N8F7 131 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 OR4M1Q8NGD0 313 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 SIGLEC11Q96RL6 698 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 ST6GALNAC5Q9BVH7 336 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 GON7Q9BXV9 100 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 CGGBP1Q9UFW8 167 aaPredicted RBP12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 TPOP07202 933 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 AKR1C4P17516 323 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 MSR1P21757 451 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 IL32P24001 234 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 LAP3P28838 519 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 CLDN15P56746 228 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 CXADRP78310 365 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 FUT5Q11128 374 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 LYPD8Q6UX82 237 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 OR5H2Q8NGV7 314 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 SAP25Q8TEE9 199 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 ZMAT3Q9HA38 289 aaKnown RBP12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 GLTPQ9NZD2 209 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 PILRBQ9UKJ0 227 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 KCNIP3Q9Y2W7 256 aa12.81□□□□□ -0.36
SHROOM1-203ENST00000378679 ANKRD36A6QL64 1941 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 A0A087WZY1 265 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 UBL3O95164 117 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 PDGFAP04085 211 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 GABRR1P24046 479 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 GALNSP34059 522 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 IL10RAQ13651 578 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 SLC36A2Q495M3 483 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 ST8SIA2Q92186 375 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 APH1AQ96BI3 265 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 DCLRE1CQ96SD1 692 aaKnown RBP12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 ABHD6Q9BV23 337 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 A0A0X1KG70 313 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms