RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 HTR5AP47898 357 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 SELENOPP49908 381 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 NANOS3P60323 173 aaKnown RBP7.28□□□□□ -1.24
CKAP2-203ENST00000378037 RPL27P61353 136 aaKnown RBP7.28□□□□□ -1.24
CKAP2-203ENST00000378037 RELAQ04206 551 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 PRKCDQ05655 676 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 TRIP6Q15654 476 aaKnown RBP7.28□□□□□ -1.24
CKAP2-203ENST00000378037 TATDN3Q17R31 274 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 SMUG1Q53HV7 270 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 MANEAQ5SRI9 462 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 CDCP2Q5VXM1 449 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 HBMQ6B0K9 141 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 ZNF585AQ6P3V2 769 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 ANKRD16Q6P6B7 361 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 OPN5Q6U736 354 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 DPY19L2P2Q6ZN68 376 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 AAED1Q7RTV5 226 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 MISPQ8IVT2 679 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 RNASE11Q8TAA1 199 aaKnown RBP7.28□□□□□ -1.24
CKAP2-203ENST00000378037 GPR148Q8TDV2 347 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 SCARF2Q96GP6 870 aaPredicted RBP7.28□□□□□ -1.24
CKAP2-203ENST00000378037 SMIM10Q96HG1 83 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 ZNF385AQ96PM9 386 aaKnown RBP7.28□□□□□ -1.24
CKAP2-203ENST00000378037 ARHGAP9Q9BRR9 750 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 PTDSS2Q9BVG9 487 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 SELENOIQ9C0D9 397 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 ADGRL4Q9HBW9 690 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 HIVEP3Q5T1R4 2406 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 OR2M5A3KFT3 312 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 OR5H15A6NDH6 313 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 BHLHE40O14503 412 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 WNT11O96014 354 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 TPOP07202 933 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 RFPL3SP0C7P2 107 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 SRMP19623 302 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 FUT7Q11130 342 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 SKP2Q13309 424 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 MLC1Q15049 377 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 ACER2Q5QJU3 275 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 SFRP5Q5T4F7 317 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 TMEM205Q6UW68 189 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 CXorf67Q86X51 503 aaPredicted RBP7.28□□□□□ -1.24
CKAP2-203ENST00000378037 C17orf50Q8WW18 174 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 SEC22AQ96IW7 307 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 SIGLEC11Q96RL6 698 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 UTP23Q9BRU9 249 aaKnown RBP7.28□□□□□ -1.24
CKAP2-203ENST00000378037 SIAEQ9HAT2 523 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 CRLF2Q9HC73 371 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 ADAMTS9Q9P2N4 1935 aa7.28□□□□□ -1.24
CKAP2-203ENST00000378037 IGKV1D-43A0A0B4J1Z2 117 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 LOC101059948A0A1B0GTJ6 334 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 MT-CO3P00414 261 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 HLA-HP01893 362 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 SEMG1P04279 462 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 NUDT1P36639 197 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 EMP3P54852 163 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 ACTC1P68032 377 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 ACTA1P68133 377 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 GALEQ14376 348 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 DNM1P34Q6PK57 102 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 RNF113BQ8IZP6 322 aaKnown RBP7.27□□□□□ -1.25
CKAP2-203ENST00000378037 OR4S1Q8NGB4 309 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 NUDCD2Q8WVJ2 157 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 SPSB2Q99619 263 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 ACKR4Q9NPB9 350 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 ELF5Q9UKW6 265 aaPredicted RBP7.27□□□□□ -1.25
CKAP2-203ENST00000378037 HS3ST3B1Q9Y662 390 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 V9GY05 133 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 SERTM1A2A2V5 107 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 PRSS37A4D1T9 235 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 FRG2CA6NGY1 282 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 SAGE2PA6NJ88 616 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 SDCBPO00560 298 aaPredicted RBP7.27□□□□□ -1.25
CKAP2-203ENST00000378037 MRPL33O75394 65 aaKnown RBP7.27□□□□□ -1.25
CKAP2-203ENST00000378037 DHFRP00374 187 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 IGHG1P01857 330 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 AMY2AP04746 511 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 FAHP16930 419 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 CASP3P42574 277 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 FRKP42685 505 aaPredicted RBP7.27□□□□□ -1.25
CKAP2-203ENST00000378037 MAGEA5P43359 124 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 ACTA2P62736 377 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 ACTG2P63267 376 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 ZNF85Q03923 595 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 EGR4Q05215 589 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 BAMBIQ13145 260 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 GPR50Q13585 617 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 OCLNQ16625 522 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 RPL13AP3Q6NVV1 102 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 MAMSTRQ6ZN01 415 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 ZNF813Q6ZN06 617 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 ZNF227Q86WZ6 799 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 DNASE2BQ8WZ79 361 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 MNTQ99583 582 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 SEC22CQ9BRL7 303 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 CDCA4Q9BXL8 241 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 RNF32Q9H0A6 362 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 DIABLOQ9NR28 239 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 PLSCR3Q9NRY6 295 aa7.27□□□□□ -1.25
CKAP2-203ENST00000378037 TREM2Q9NZC2 230 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms