RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 PTP4A3O75365 173 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 DLX2Q07687 328 aaPredicted RBP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 SPIN3Q5JUX0 258 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 GLYATL2Q8WU03 294 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 AUNIPQ9H7T9 357 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 CLDN34H7C241 214 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 SLC31A1O15431 190 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 HCRTR1O43613 425 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 OR8G3PP0DMU2 310 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 TAS1R1Q7RTX1 841 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 ANAPC16Q96DE5 110 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 OBP2BQ9NPH6 170 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 TRAV6A0A075B6T7 132 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 A0A0B4J2E0 115 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 C13orf42A0A1B0GVH6 325 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 A0A1B0GX12 115 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 GLB1P16278 677 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 CEBPGP53567 150 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 FCRLAQ7L513 359 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 H1FOOQ8IZA3 346 aaPredicted RBP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 TNFRSF13CQ96RJ3 184 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 BOKQ9UMX3 212 aaPredicted RBP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 EPPINO95925 133 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 CH25HO95992 272 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 ZNF74Q16587 644 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 FAM109BQ6ICB4 259 aaPredicted RBP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 PRRG4Q9BZD6 226 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 B4GAT1O43505 415 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 MT-ND6P03923 174 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 FCN2Q15485 313 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 SYPL1Q16563 259 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 FBXO46Q6PJ61 603 aaPredicted RBP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 OR4K13Q8NH42 304 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 PGAM5Q96HS1 289 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 CHAF1BQ13112 559 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 GPM6BQ13491 265 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 INPP5JQ15735 1006 aaPredicted RBP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 ZNF285Q96NJ3 590 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.5□□□□□ -1.69
PCDH9-201ENST00000377861 ALKBH4Q9NXW9 302 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 R4GMQ9 66 aa4.5□□□□□ -1.69
PCDH9-201ENST00000377861 ZNF831Q5JPB2 1677 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 A6NLC8 198 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 A8MXK9 166 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 LMO7DNF2Z398 122 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 K7ERQ8 282 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 DXOO77932 396 aaKnown RBP4.49□□□□□ -1.69
PCDH9-201ENST00000377861 GRPRP30550 384 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 ERVS71-1P61550 626 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 GABRG1Q8N1C3 465 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 ENY2Q9NPA8 101 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 SLC39A9Q9NUM3 307 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 KCMF1Q9P0J7 381 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 LRP5O75197 1615 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 ANKRD30BLA7E2S9 258 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 C1orf140Q5VVS0 124 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 OR2A2Q6IF42 318 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 NPY4RP50391 375 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 ACSM5Q6NUN0 579 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 MSRB3Q8IXL7 192 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 CLECL1Q8IZS7 167 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 PCDHGA5Q9Y5G8 931 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 C20orf202A1L168 122 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 CSF2RBP32927 897 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 P2RY1P47900 373 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 OR7E24Q6IFN5 339 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 RAB8BQ92930 207 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 PTP4A1Q93096 173 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 RARRES3Q9UL19 164 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 CT45A8P0DMV1 189 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 CT45A9P0DMV2 189 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 TAS2R45P59539 299 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 CT45A2Q5DJT8 189 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 AGBL5Q8NDL9 886 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 CLN5O75503 358 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 DAOP14920 347 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 SOX3P41225 446 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 LIM2P55344 173 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 MRPL2Q5T653 305 aaKnown RBP4.49□□□□□ -1.69
PCDH9-201ENST00000377861 K7EQM0 130 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 M0R082 166 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 PAFAH1B2P68402 229 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 STAC2Q6ZMT1 411 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 MOB3CQ70IA8 216 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 RNF170Q96K19 258 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 PPP1R14DQ9NXH3 145 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 MCTS1Q9ULC4 181 aaKnown RBP4.49□□□□□ -1.69
PCDH9-201ENST00000377861 KHDC3LQ587J8 217 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 RNF44Q7L0R7 432 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 GPR137CQ8N3F9 429 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 CLDND1Q9NY35 253 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 PHOX2AO14813 284 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 ACER2Q5QJU3 275 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 ARV1Q9H2C2 271 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 PURGQ9UJV8 347 aaKnown RBP4.49□□□□□ -1.69
PCDH9-201ENST00000377861 PLSCR5A0PG75 271 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 CSF2P04141 144 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 HOXA6P31267 233 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 PLCXD2Q0VAA5 305 aa4.49□□□□□ -1.69
PCDH9-201ENST00000377861 ST7LQ8TDW4 575 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms