RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 TLCD2A6NGC4 264 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 G3V3Q6 166 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 SH2D1BO14796 132 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 ALPLP05186 524 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 CSF3P09919 207 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 HTR3DQ70Z44 454 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 PIANPQ8IYJ0 282 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 ZFPM2Q8WW38 1151 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 NUDT19A8MXV4 375 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 YIF1AO95070 293 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 UBAC2Q8NBM4 344 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 TREX1Q9NSU2 369 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 ZNF813Q6ZN06 617 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 CCDC74AQ96AQ1 378 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 MBP02144 154 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 YPEL5P62699 121 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 NTHL1P78549 312 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 KIAA0141Q14154 515 aaPredicted RBP11.48□□□□□ -0.57
VPS13A-204ENST00000376634 PLPP7Q8NBV4 271 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 OR2AK2Q8NG84 335 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 TMIGD2Q96BF3 282 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 KLK4Q9Y5K2 254 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 MN1Q10571 1320 aaPredicted RBP11.48□□□□□ -0.57
VPS13A-204ENST00000376634 G3V3Y1 287 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 P2RY10O00398 339 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 CPXM2Q8N436 756 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 LCORQ96JN0 433 aaPredicted RBP11.48□□□□□ -0.57
VPS13A-204ENST00000376634 MBOAT4Q96T53 435 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 SLC29A1Q99808 456 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 RTL8AQ9BWD3 113 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 TMED7-TICAM2A0A0A6YYA0 188 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 MT-ATP6P00846 226 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 GLAP06280 429 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 CLDN10P78369 228 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 ALKBH1Q13686 389 aaKnown RBP11.48□□□□□ -0.57
VPS13A-204ENST00000376634 SYPL1Q16563 259 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 A4GALTQ9NPC4 353 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 TMED7Q9Y3B3 224 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 USF1P22415 310 aaPredicted RBP11.48□□□□□ -0.57
VPS13A-204ENST00000376634 ADRA1AP35348 466 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 OR5M8Q8NGP6 311 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 H2AFB1P0C5Y9 115 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 CCR6P51684 374 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 LEXMQ3ZCV2 418 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 GGTA1PQ4G0N0 100 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 ZNF620Q6ZNG0 422 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 SEC22AQ96IW7 307 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 AK3Q9UIJ7 227 aa11.48□□□□□ -0.57
VPS13A-204ENST00000376634 OR51I2Q9H344 312 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 SIT1Q9Y3P8 196 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 M0QYG6 137 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 TO15178 435 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 MAP2K6P52564 334 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 HSF1Q00613 529 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 OR2G6Q5TZ20 316 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 C11orf40Q8WZ69 217 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 GPR171O14626 319 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 MTNR1BP49286 362 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 PRDX1Q06830 199 aaKnown RBP11.47□□□□□ -0.57
VPS13A-204ENST00000376634 GPR55Q9Y2T6 319 aaPredicted RBP11.47□□□□□ -0.57
VPS13A-204ENST00000376634 PRAMEF25A6NGN4 478 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 ELAVL4P26378 380 aaKnown RBP11.47□□□□□ -0.57
VPS13A-204ENST00000376634 DVL3Q92997 716 aaPredicted RBP11.47□□□□□ -0.57
VPS13A-204ENST00000376634 AMBRA1Q9C0C7 1298 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 CCL11P51671 97 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 H3F3CQ6NXT2 135 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 NRARPQ7Z6K4 114 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 SIAH1Q8IUQ4 282 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 PARP14Q460N5 1801 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 DDX60LQ5H9U9 1706 aaKnown RBP11.47□□□□□ -0.57
VPS13A-204ENST00000376634 TGOLN2O43493 480 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 ADRB1P08588 477 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 RFX2P48378 723 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 ERHP84090 104 aaKnown RBP11.47□□□□□ -0.57
VPS13A-204ENST00000376634 DUSP6Q16828 381 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 CLDN22Q8N7P3 220 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 LYSMD1Q96S90 227 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 FAM117AQ9C073 453 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 SBF1O95248 1867 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 MYADML2A6NDP7 307 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 TRAPPC2P0DI81 140 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 TRAPPC2BP0DI82 140 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 TPMTP51580 245 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 TSEN54Q7Z6J9 526 aaKnown RBP11.47□□□□□ -0.57
VPS13A-204ENST00000376634 CBLL1Q75N03 491 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 HES7Q9BYE0 225 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 MED9Q9NWA0 146 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 IL17CQ9P0M4 197 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 RNF150Q9ULK6 438 aa11.47□□□□□ -0.57
VPS13A-204ENST00000376634 OR6C76A6NM76 312 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 F10P00742 488 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 HNRNPA3P51991 378 aaKnown RBP11.46□□□□□ -0.57
VPS13A-204ENST00000376634 CTBSQ01459 385 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 ZNF85Q03923 595 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 DCXRQ7Z4W1 244 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 LRRTM3Q86VH5 581 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 LGI3Q8N145 548 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 NECAP1Q8NC96 275 aa11.46□□□□□ -0.57
VPS13A-204ENST00000376634 ELF4Q99607 663 aaPredicted RBP11.46□□□□□ -0.57
VPS13A-204ENST00000376634 RAB6CQ9H0N0 254 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms