RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 ARHGEF17Q96PE2 2063 aaPredicted RBP19.05■□□□□ 0.64
UPF3A-202ENST00000375299 OR2AT4A6NND4 320 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 RORAP35398 523 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 PRKXP51817 358 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 SCRN3Q0VDG4 424 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 INPP5JQ15735 1006 aaPredicted RBP19.04■□□□□ 0.64
UPF3A-202ENST00000375299 TEX30Q5JUR7 227 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 C3orf33Q6P1S2 294 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 PAPD4Q6PIY7 484 aaKnown RBP19.04■□□□□ 0.64
UPF3A-202ENST00000375299 SLC25A42Q86VD7 318 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 ZNF679Q8IYX0 411 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 THAP6Q8TBB0 222 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 DGAT2Q96PD7 388 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 ZNF587Q96SQ5 575 aaPredicted RBP19.04■□□□□ 0.64
UPF3A-202ENST00000375299 ZMAT3Q9HA38 289 aaKnown RBP19.04■□□□□ 0.64
UPF3A-202ENST00000375299 CPNE7Q9UBL6 633 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 CGGBP1Q9UFW8 167 aaPredicted RBP19.04■□□□□ 0.64
UPF3A-202ENST00000375299 ATPIF1Q9UII2 106 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 PLEKHA6Q9Y2H5 1048 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 A0A0A6YYH2 397 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 A6NJ64 397 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 HLA-DQA2P01906 255 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 CSN2P05814 226 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 CTSBP07858 339 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 SKP2Q13309 424 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 MEF2DQ14814 521 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 ELOCQ15369 112 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 RAB12Q6IQ22 244 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 CBLN3Q6UW01 205 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 ZNF584Q8IVC4 421 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 FAM174AQ8TBP5 190 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 ASB5Q8WWX0 329 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 ASB17Q8WXJ9 295 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 OR10A5Q9H207 317 aa19.04■□□□□ 0.64
UPF3A-202ENST00000375299 PRMT8Q9NR22 394 aaPredicted RBP19.04■□□□□ 0.64
UPF3A-202ENST00000375299 MRPS18BQ9Y676 258 aaKnown RBP19.04■□□□□ 0.64
UPF3A-202ENST00000375299 FGF16O43320 207 aa19.03■□□□□ 0.64
UPF3A-202ENST00000375299 CD2P06729 351 aa19.03■□□□□ 0.64
UPF3A-202ENST00000375299 IGFBP3P17936 291 aaPredicted RBP19.03■□□□□ 0.64
UPF3A-202ENST00000375299 FSTP19883 344 aa19.03■□□□□ 0.64
UPF3A-202ENST00000375299 CBX5P45973 191 aa19.03■□□□□ 0.64
UPF3A-202ENST00000375299 AKR1C2P52895 323 aa19.03■□□□□ 0.64
UPF3A-202ENST00000375299 AKR1C1Q04828 323 aa19.03■□□□□ 0.64
UPF3A-202ENST00000375299 PPP1R1AQ13522 171 aa19.03■□□□□ 0.64
UPF3A-202ENST00000375299 DEFB110Q30KQ9 67 aa19.03■□□□□ 0.64
UPF3A-202ENST00000375299 MOGAT2Q3SYC2 334 aa19.03■□□□□ 0.64
UPF3A-202ENST00000375299 ZNF813Q6ZN06 617 aa19.03■□□□□ 0.64
UPF3A-202ENST00000375299 INO80EQ8NBZ0 244 aaPredicted RBP19.03■□□□□ 0.64
UPF3A-202ENST00000375299 PHOSPHO1Q8TCT1 267 aa19.03■□□□□ 0.64
UPF3A-202ENST00000375299 PATE1Q8WXA2 126 aa19.03■□□□□ 0.64
UPF3A-202ENST00000375299 PRRT1Q99946 306 aa19.03■□□□□ 0.64
UPF3A-202ENST00000375299 HRASLS2Q9NWW9 162 aa19.03■□□□□ 0.64
UPF3A-202ENST00000375299 SLC2A8Q9NY64 477 aa19.03■□□□□ 0.64
UPF3A-202ENST00000375299 IL2RAP01589 272 aa19.03■□□□□ 0.64
UPF3A-202ENST00000375299 CA3P07451 260 aa19.03■□□□□ 0.64
UPF3A-202ENST00000375299 DCNP07585 359 aaKnown RBP19.03■□□□□ 0.64
UPF3A-202ENST00000375299 PVALBP20472 110 aaPredicted RBP19.03■□□□□ 0.64
UPF3A-202ENST00000375299 MFGE8Q08431 387 aaPredicted RBP19.03■□□□□ 0.64
UPF3A-202ENST00000375299 NKPD1Q17RQ9 610 aa19.03■□□□□ 0.64
UPF3A-202ENST00000375299 CMKLR1Q99788 373 aa19.03■□□□□ 0.64
UPF3A-202ENST00000375299 KXD1Q9BQD3 176 aa19.03■□□□□ 0.64
UPF3A-202ENST00000375299 CACNA1CQ13936 2221 aa19.02■□□□□ 0.64
UPF3A-202ENST00000375299 FAM25EA8MYX2 175 aa19.02■□□□□ 0.64
UPF3A-202ENST00000375299 LDLRAD4O15165 306 aa19.02■□□□□ 0.64
UPF3A-202ENST00000375299 APBB3O95704 486 aa19.02■□□□□ 0.64
UPF3A-202ENST00000375299 TACR3P29371 465 aa19.02■□□□□ 0.64
UPF3A-202ENST00000375299 IGLV3-21P80748 117 aaPredicted RBP19.02■□□□□ 0.64
UPF3A-202ENST00000375299 UNQ6126/PRO20091Q6UXV3 157 aa19.02■□□□□ 0.64
UPF3A-202ENST00000375299 OR4S1Q8NGB4 309 aa19.02■□□□□ 0.64
UPF3A-202ENST00000375299 MITD1Q8WV92 249 aa19.02■□□□□ 0.64
UPF3A-202ENST00000375299 TAAR8Q969N4 342 aa19.02■□□□□ 0.64
UPF3A-202ENST00000375299 FOXN4Q96NZ1 517 aa19.02■□□□□ 0.64
UPF3A-202ENST00000375299 CST11Q9H112 138 aa19.02■□□□□ 0.64
UPF3A-202ENST00000375299 IFT22Q9H7X7 185 aa19.02■□□□□ 0.64
UPF3A-202ENST00000375299 MBD2Q9UBB5 411 aa19.02■□□□□ 0.64
UPF3A-202ENST00000375299 A0A0A6YYC8 382 aaPredicted RBP19.01■□□□□ 0.63
UPF3A-202ENST00000375299 C9orf170A2RU37 121 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 TMEM235A6NFC5 223 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 I3L1I5 382 aaPredicted RBP19.01■□□□□ 0.63
UPF3A-202ENST00000375299 FADS1O60427 444 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 CD37P11049 281 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 RNH1P13489 461 aaKnown RBP19.01■□□□□ 0.63
UPF3A-202ENST00000375299 GDI1P31150 447 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 KIR2DL1P43626 348 aaPredicted RBP19.01■□□□□ 0.63
UPF3A-202ENST00000375299 RAB13P51153 203 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 PPP1CAP62136 330 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 ALG11Q2TAA5 492 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 DHRS7BQ6IAN0 325 aaPredicted RBP19.01■□□□□ 0.63
UPF3A-202ENST00000375299 SLC18B1Q6NT16 456 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 CORO6Q6QEF8 472 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 CD163Q86VB7 1156 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 CBLN2Q8IUK8 224 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 ELSPBP1Q96BH3 223 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 ZNF524Q96C55 264 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 C12orf57Q99622 126 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 ADAT1Q9BUB4 502 aaKnown RBP19.01■□□□□ 0.63
UPF3A-202ENST00000375299 PRTFDC1Q9NRG1 225 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 ZNF629Q9UEG4 869 aaPredicted RBP19.01■□□□□ 0.63
UPF3A-202ENST00000375299 B9D1Q9UPM9 204 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 K7EQS6 105 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms