RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 A0A087WV48 116 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 A0A0A6YYH2 397 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 A0A1B0GTH9 108 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 CDC14CA4D256 554 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 A6NJ64 397 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 YKT6O15498 198 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 ALDOBP05062 364 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 AKAIN1P0CW23 69 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 CD37P11049 281 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 ACHEP22303 614 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 CCKBRP32239 447 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 CSF2RBP32927 897 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 POU3F4P49335 361 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 SELENOPP49908 381 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 ACTBP60709 375 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 ACTG1P63261 375 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 PCGF3Q3KNV8 242 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 VWA2Q5GFL6 755 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 CLLU1Q5K131 121 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 FAM166AQ6J272 317 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 DEGS2Q6QHC5 323 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 WDR74Q6RFH5 385 aaPredicted RBP12.52□□□□□ -0.4
HMGCL-203ENST00000374490 RABEPKQ7Z6M1 372 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 FAM3DQ96BQ1 224 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 MS4A3Q96HJ5 214 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 CITED4Q96RK1 184 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 AMELYQ99218 206 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 SEMA4CQ9C0C4 833 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 SCPEP1Q9HB40 452 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 MRPL22Q9NWU5 206 aaKnown RBP12.52□□□□□ -0.4
HMGCL-203ENST00000374490 ZNF69Q9UC07 566 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 R4GMQ9 66 aa12.52□□□□□ -0.4
HMGCL-203ENST00000374490 CACNA1EQ15878 2313 aa12.52□□□□□ -0.41
HMGCL-203ENST00000374490 A0A1W2PQ72 361 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 LNP1A1A4G5 178 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 LEUTXA8MZ59 168 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 TOX3O15405 576 aaPredicted RBP12.51□□□□□ -0.41
HMGCL-203ENST00000374490 GMFGO60234 142 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 OR2A4O95047 310 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 PLGP00747 810 aaPredicted RBP12.51□□□□□ -0.41
HMGCL-203ENST00000374490 ATXN8OSP0DMR3 200 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 FOLR1P15328 257 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 ZNF823P16415 610 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 IGFBP3P17936 291 aaPredicted RBP12.51□□□□□ -0.41
HMGCL-203ENST00000374490 PRSS3P35030 304 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 APOBEC1P41238 236 aaKnown RBP12.51□□□□□ -0.41
HMGCL-203ENST00000374490 PSMA6P60900 246 aaKnown RBP12.51□□□□□ -0.41
HMGCL-203ENST00000374490 TSPAN5P62079 268 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 RPS15P62841 145 aaKnown RBP12.51□□□□□ -0.41
HMGCL-203ENST00000374490 SHBQ15464 509 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 LYPD8Q6UX82 237 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 NDUFAF7Q7L592 441 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 CDH26Q8IXH8 852 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 FTMTQ8N4E7 242 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 BMPERQ8N8U9 685 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 OR51D1Q8NGF3 324 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 OR6M1Q8NGM8 313 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 OR6N1Q8NGY5 312 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 MFSD8Q8NHS3 518 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 CEP76Q8TAP6 659 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 C17orf50Q8WW18 174 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 ZNF501Q96CX3 271 aaPredicted RBP12.51□□□□□ -0.41
HMGCL-203ENST00000374490 OR2A7Q96R45 310 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 ZNF587Q96SQ5 575 aaPredicted RBP12.51□□□□□ -0.41
HMGCL-203ENST00000374490 SEC22CQ9BRL7 303 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 ABHD6Q9BV23 337 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 ULBP3Q9BZM4 244 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 SLCO5A1Q9H2Y9 848 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 ZNF768Q9H5H4 540 aaKnown RBP12.51□□□□□ -0.41
HMGCL-203ENST00000374490 TMEM9BQ9NQ34 198 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 UPB1Q9UBR1 384 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 ZNF107Q9UII5 783 aaPredicted RBP12.51□□□□□ -0.41
HMGCL-203ENST00000374490 HEATR5AQ86XA9 2040 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 CIB4A0PJX0 185 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 FTCDNL1E5RQL4 147 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 ZNF208O43345 1280 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 GPANK1O95872 356 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 TMIGD3P0DMS9 266 aaPredicted RBP12.51□□□□□ -0.41
HMGCL-203ENST00000374490 CTLA4P16410 223 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 RPS27P42677 84 aaKnown RBP12.51□□□□□ -0.41
HMGCL-203ENST00000374490 EFNA3P52797 238 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 RAB14P61106 215 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 RNF4P78317 190 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 CFHR1Q03591 330 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 PUDPQ08623 228 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 C17orf67Q0P5P2 114 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 HLA-BQ31612 363 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 C2orf76Q3KRA6 126 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 TMEM225Q6GV28 225 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 ZNF704Q6ZNC4 412 aaPredicted RBP12.51□□□□□ -0.41
HMGCL-203ENST00000374490 SLC35D2Q76EJ3 337 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 OR8H3Q8N146 312 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 OR51A4Q8NGJ6 313 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 OR8K3Q8NH51 312 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 NUBPLQ8TB37 319 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 FGF21Q9NSA1 209 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 HHLA2Q9UM44 414 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 MAB21L2Q9Y586 359 aa12.51□□□□□ -0.41
HMGCL-203ENST00000374490 PI4KAP42356 2102 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 TRAV18A0A075B6X5 111 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms