RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 C11orf40Q8WZ69 217 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 ABHD1Q96SE0 405 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 WACQ9BTA9 647 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 TIGARQ9NQ88 270 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 ING1Q9UK53 422 aaPredicted RBP11.16□□□□□ -0.62
PRPF4-202ENST00000374199 CAMK2AQ9UQM7 478 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 TRAV8-7A0A075B6U6 113 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 A0A1B0GTH9 108 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 A0A1W2PNR3 127 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 LINC01387J3KSC0 135 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 PSMD9O00233 223 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 SERPINI2O75830 405 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 SLC2A2P11168 524 aaPredicted RBP11.16□□□□□ -0.62
PRPF4-202ENST00000374199 LSM6P62312 80 aaKnown RBP11.16□□□□□ -0.62
PRPF4-202ENST00000374199 LRRN1Q6UXK5 716 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 OR5M1Q8NGP8 315 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 OR10AC1Q8NH08 325 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 NSMAFQ92636 917 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 INTS12Q96CB8 462 aaKnown RBP11.16□□□□□ -0.62
PRPF4-202ENST00000374199 OR5B2Q96R09 309 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 SLC22A4Q9H015 551 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 SDK1Q7Z5N4 2213 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 ACOD1A6NK06 481 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 GJE1A6NN92 205 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 GLSO94925 669 aaPredicted RBP11.16□□□□□ -0.62
PRPF4-202ENST00000374199 CLDN15P56746 228 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 CLDN6P56747 220 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 THEM6Q8WUY1 208 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 RBFOX1Q9NWB1 397 aaKnown RBP11.16□□□□□ -0.62
PRPF4-202ENST00000374199 EXTL2Q9UBQ6 330 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 V9GY05 133 aa11.16□□□□□ -0.62
PRPF4-202ENST00000374199 ZNF716A6NP11 495 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 LDLRAD4O15165 306 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 ATP6V1G1O75348 118 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 ACHEP22303 614 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 RIDAP52758 137 aaKnown RBP11.15□□□□□ -0.62
PRPF4-202ENST00000374199 RAC3P60763 192 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 STK11Q15831 433 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 TMEM176BQ3YBM2 270 aaPredicted RBP11.15□□□□□ -0.62
PRPF4-202ENST00000374199 DNAJA3Q96EY1 480 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 NEDD4LQ96PU5 975 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 SRXN1Q9BYN0 137 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 COMMD4Q9H0A8 199 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 TMEM165Q9HC07 324 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 SLC17A5Q9NRA2 495 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 A0A0B4J293 547 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 A0A0J9YW62 118 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 PINLYPA6NC86 204 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 SMAD9O15198 467 aaKnown RBP11.15□□□□□ -0.62
PRPF4-202ENST00000374199 RAD1O60671 282 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 TMCC2O75069 709 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 PAHP00439 452 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 OTX1P32242 354 aaPredicted RBP11.15□□□□□ -0.62
PRPF4-202ENST00000374199 KIR2DL3P43628 341 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 OR2B6P58173 313 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 CSNK2A1P68400 391 aaPredicted RBP11.15□□□□□ -0.62
PRPF4-202ENST00000374199 C20orf196Q8IYI0 205 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 SAMD12Q8N8I0 201 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 NKD1Q969G9 470 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 YIPF5Q969M3 257 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 MOB1AQ9H8S9 216 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 OR5V1Q9UGF6 321 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 RCE1Q9Y256 329 aa11.15□□□□□ -0.62
PRPF4-202ENST00000374199 FREM3P0C091 2139 aa11.15□□□□□ -0.63
PRPF4-202ENST00000374199 PRR33A8MZF0 331 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 SULT2B1O00204 365 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 SULT1B1O43704 296 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 SPARCP09486 303 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 SLC6A1P30531 599 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 OTX2P32243 289 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 DLSTP36957 453 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 B3GNTL1Q67FW5 361 aaPredicted RBP11.14□□□□□ -0.63
PRPF4-202ENST00000374199 DCXRQ7Z4W1 244 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 SYT9Q86SS6 491 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 RAB43Q86YS6 212 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 MDS2Q8NDY4 140 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 OR9K2Q8NGE7 335 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 MARVELD1Q9BSK0 173 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 MFAP5Q13361 173 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 PLA1AQ53H76 456 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 PYDC2Q56P42 97 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 DCAF10Q5QP82 559 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 ELMOD2Q8IZ81 293 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 TMEM156Q8N614 296 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 CELF2-AS1Q8N7Q2 184 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 SSC4DQ8WTU2 575 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 ZNF703Q9H7S9 590 aaPredicted RBP11.14□□□□□ -0.63
PRPF4-202ENST00000374199 AK6Q9Y3D8 172 aaKnown RBP11.14□□□□□ -0.63
PRPF4-202ENST00000374199 IGKV3D-15A0A087WSY6 115 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 LANCL1O43813 399 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 RFPL3SP0C7P2 107 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 NR2C1P13056 603 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 MAGEB1P43366 347 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 TCF15Q12870 199 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 TRIP6Q15654 476 aaKnown RBP11.14□□□□□ -0.63
PRPF4-202ENST00000374199 PHYHD1Q5SRE7 291 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 AGAP6Q5VW22 663 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 CFAP77Q6ZQR2 320 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 OR8H2Q8N162 312 aa11.14□□□□□ -0.63
PRPF4-202ENST00000374199 LGALS14Q8TCE9 139 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms