RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 SSR2P43308 183 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 ID4P47928 161 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 SKP1P63208 163 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 RHEBQ15382 184 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 C2orf76Q3KRA6 126 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 ZNF684Q5T5D7 378 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 TMPPEQ6ZT21 453 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 SPRED2Q7Z698 418 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 C19orf47Q8N9M1 422 aaKnown RBP11.68□□□□□ -0.54
PRPF4-201ENST00000374198 OR1J1Q8NGS3 322 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 OR8U1Q8NH10 309 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 ADAMTS15Q8TE58 950 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 S100A13Q99584 98 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 SYT4Q9H2B2 425 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 USP36Q9P275 1121 aaKnown RBP11.68□□□□□ -0.54
PRPF4-201ENST00000374198 TAC3Q9UHF0 121 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 CBY1Q9Y3M2 126 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 SEC14L6B5MCN3 397 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 CSN2P05814 226 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 GRPRP30550 384 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 CD70P32970 193 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 RPS10P46783 165 aaKnown RBP11.68□□□□□ -0.54
PRPF4-201ENST00000374198 SULT1A2P50226 295 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 FOXO1Q12778 655 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 HYAL4Q2M3T9 481 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 EIPR1Q53HC9 387 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 FAM46CQ5VWP2 391 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 OR5K2Q8NHB8 316 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 ZNF417Q8TAU3 575 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 RAB33BQ9H082 229 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 SPACA1Q9HBV2 294 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 FRRS1LQ9P0K9 344 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 WDR45Q9Y484 360 aa11.68□□□□□ -0.54
PRPF4-201ENST00000374198 AK1P00568 194 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 VAMP1P23763 118 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 CEACAM6P40199 344 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 NUTF2P61970 127 aaKnown RBP11.67□□□□□ -0.54
PRPF4-201ENST00000374198 POLR2LP62875 67 aaKnown RBP11.67□□□□□ -0.54
PRPF4-201ENST00000374198 HSD11B2P80365 405 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 CYCSP99999 105 aaKnown RBP11.67□□□□□ -0.54
PRPF4-201ENST00000374198 CLLU1OSQ5K130 101 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 PAPD4Q6PIY7 484 aaKnown RBP11.67□□□□□ -0.54
PRPF4-201ENST00000374198 ZNF793Q6ZN11 406 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 NRROSQ86YC3 692 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 SUSD6Q92537 303 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 FAM3DQ96BQ1 224 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 LRFN5Q96NI6 719 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 YPEL4Q96NS1 127 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 SLCO5A1Q9H2Y9 848 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 PELI2Q9HAT8 420 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 SLC17A5Q9NRA2 495 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 CHRNA9Q9UGM1 479 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 TMED7Q9Y3B3 224 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 TRBV5-7A0A0A0MS05 114 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 LOC100289279A0A1B0GTE1 492 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 AK4P27144 223 aaPredicted RBP11.67□□□□□ -0.54
PRPF4-201ENST00000374198 EIF5AP63241 154 aaKnown RBP11.67□□□□□ -0.54
PRPF4-201ENST00000374198 USF2Q15853 346 aaPredicted RBP11.67□□□□□ -0.54
PRPF4-201ENST00000374198 OR2A2Q6IF42 318 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 C22orf39Q6P5X5 142 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 ACOT4Q8N9L9 421 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 SLC16A11Q8NCK7 471 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 OR9A2Q8NGT5 310 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 OR6K6Q8NGW6 343 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 PRAP1Q96NZ9 151 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 SUCNR1Q9BXA5 334 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 TAF9BQ9HBM6 251 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 HMGA1P17096 107 aaKnown RBP11.67□□□□□ -0.54
PRPF4-201ENST00000374198 CSNK2A2P19784 350 aaPredicted RBP11.67□□□□□ -0.54
PRPF4-201ENST00000374198 CFPP27918 469 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 TACR3P29371 465 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 CX3CR1P49238 355 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 GATMP50440 423 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 RAB1AP62820 205 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 FHL1Q13642 323 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 HIST2H3AQ71DI3 136 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 ZNF627Q7L945 461 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 CD163Q86VB7 1156 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 GKN2Q86XP6 184 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 OR6X1Q8NH79 312 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 LCN9Q8WX39 176 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 CDS1Q92903 461 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 TMEM106AQ96A25 262 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 AQP10Q96PS8 301 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 PRRT1Q99946 306 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 SLC5A7Q9GZV3 580 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 DUSP22Q9NRW4 184 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 ZNF107Q9UII5 783 aaPredicted RBP11.67□□□□□ -0.54
PRPF4-201ENST00000374198 STARD10Q9Y365 291 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 ATG4BQ9Y4P1 393 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 FLVCR1Q9Y5Y0 555 aa11.67□□□□□ -0.54
PRPF4-201ENST00000374198 A0A1B0GVT2 93 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 A0A1W2PR48 441 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 OR1F1O43749 312 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 UPK3AO75631 287 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 DUS4LO95620 317 aaKnown RBP11.66□□□□□ -0.54
PRPF4-201ENST00000374198 HCKP08631 526 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 OR8G3PP0DMU2 310 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 HKR1P10072 659 aa11.66□□□□□ -0.54
PRPF4-201ENST00000374198 ADAM8P78325 824 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms