RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 LINC01590Q5TEZ4 76 aa12.1□□□□□ -0.47
TPM3-211ENST00000368531 TMEM154Q6P9G4 183 aa12.1□□□□□ -0.47
TPM3-211ENST00000368531 MYPOPQ86VE0 399 aaPredicted RBP12.1□□□□□ -0.47
TPM3-211ENST00000368531 ERI1Q8IV48 349 aaKnown RBP12.1□□□□□ -0.47
TPM3-211ENST00000368531 OR8J1Q8NGP2 316 aa12.1□□□□□ -0.47
TPM3-211ENST00000368531 MARVELD3Q96A59 401 aa12.1□□□□□ -0.47
TPM3-211ENST00000368531 PITX2Q99697 317 aa12.1□□□□□ -0.47
TPM3-211ENST00000368531 VCX3BQ9H321 246 aa12.1□□□□□ -0.47
TPM3-211ENST00000368531 ASH2LQ9UBL3 628 aa12.1□□□□□ -0.47
TPM3-211ENST00000368531 MOKQ9UQ07 419 aa12.1□□□□□ -0.47
TPM3-211ENST00000368531 HELZ2Q9BYK8 2649 aaKnown RBP12.09□□□□□ -0.47
TPM3-211ENST00000368531 CCDC182A6NF36 153 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 A6NNC1 897 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 ZNF593O00488 134 aaPredicted RBP12.09□□□□□ -0.47
TPM3-211ENST00000368531 SLC16A6O15403 523 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 PRODHO43272 600 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 SELENOFO60613 162 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 MRPL3P09001 348 aaKnown RBP12.09□□□□□ -0.47
TPM3-211ENST00000368531 MMP7P09237 267 aaPredicted RBP12.09□□□□□ -0.47
TPM3-211ENST00000368531 CECR9P0C854 216 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 SLC2A5P22732 501 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 NAA10P41227 235 aaPredicted RBP12.09□□□□□ -0.47
TPM3-211ENST00000368531 PCBD1P61457 104 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 ADARB1P78563 741 aaKnown RBP12.09□□□□□ -0.47
TPM3-211ENST00000368531 PSG4Q00888 419 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 IL5RAQ01344 420 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 PLP2Q04941 152 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 SPOCK1Q08629 439 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 DAZAP2Q15038 168 aaPredicted RBP12.09□□□□□ -0.47
TPM3-211ENST00000368531 BEX5Q5H9J7 111 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 NCMAPQ5T1S8 102 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 AADACL4Q5VUY2 407 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 NXNL2Q5VZ03 156 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 TTC23Q5W5X9 447 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 ZNF774Q6NX45 483 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 MEPCEQ7L2J0 689 aaKnown RBP12.09□□□□□ -0.47
TPM3-211ENST00000368531 SSX8Q7RTT4 187 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 DPPA2Q7Z7J5 298 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 ZNF295-AS1Q8N0V1 137 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 DEPDC4Q8N2C3 294 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 OR6N2Q8NGY6 317 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 OR2AJ1Q8NGZ0 328 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 SMAP2Q8WU79 429 aaPredicted RBP12.09□□□□□ -0.47
TPM3-211ENST00000368531 RADILQ96JH8 1075 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 ZNF582Q96NG8 517 aaPredicted RBP12.09□□□□□ -0.47
TPM3-211ENST00000368531 HS3ST6Q96QI5 342 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 INTS14Q96SY0 518 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 TEAD3Q99594 435 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 APOL4Q9BPW4 351 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 ADI1Q9BV57 179 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 OR2H1Q9GZK4 316 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 ESRP2Q9H6T0 727 aaKnown RBP12.09□□□□□ -0.47
TPM3-211ENST00000368531 TIMM10BQ9Y5J6 103 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 LHFPL6Q9Y693 200 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 COMMD3-BMI1R4GMX3 469 aa12.09□□□□□ -0.47
TPM3-211ENST00000368531 GCN1Q92616 2671 aaKnown RBP12.09□□□□□ -0.47
TPM3-211ENST00000368531 IQCMA0A1B0GVH7 501 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 ABCD4O14678 606 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 RER1O15258 196 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 PLAUP00749 431 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 CD3EP07766 207 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 PSKH1P11801 424 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 CCL2P13500 99 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 CD40P25942 277 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 APEX1P27695 318 aaKnown RBP12.08□□□□□ -0.48
TPM3-211ENST00000368531 CAPGP40121 348 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 ENTPD1P49961 510 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 BLVRAP53004 296 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 CDH11P55287 796 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 TLE4Q04727 773 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 SCRN3Q0VDG4 424 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 AQP6Q13520 282 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 KEAP1Q14145 624 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 SLC35D3Q5M8T2 416 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 C6orf52Q5T4I8 152 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 ADAM5Q6NVV9 412 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 TMEM108Q6UXF1 575 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 IZUMO2Q6UXV1 221 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 TMEM200AQ86VY9 491 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 ENTHD1Q8IYW4 607 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 CPEB3Q8NE35 698 aaKnown RBP12.08□□□□□ -0.48
TPM3-211ENST00000368531 TRUB1Q8WWH5 349 aaKnown RBP12.08□□□□□ -0.48
TPM3-211ENST00000368531 ZNF75AQ96N20 296 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 KCNS3Q9BQ31 491 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 WNT5BQ9H1J7 359 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 PLEK2Q9NYT0 353 aa12.08□□□□□ -0.48
TPM3-211ENST00000368531 CRNNQ9UBG3 495 aaPredicted RBP12.08□□□□□ -0.48
TPM3-211ENST00000368531 SGCEO43556 437 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 DOK2O60496 412 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 ENTPD6O75354 484 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 APOL3O95236 402 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 IGKV3-15P01624 115 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 IGLV1-44P01699 117 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 HRGP04196 525 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 SERPINA5P05154 406 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 GNAO1P09471 354 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 ZNF14P17017 642 aaPredicted RBP12.07□□□□□ -0.48
TPM3-211ENST00000368531 CCNOP22674 350 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 PTAFRP25105 342 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 LOXP28300 417 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms