RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 PGGHGQ32M88 737 aa13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 SLC36A2Q495M3 483 aa13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 FAM27BQ5VT28 67 aa13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 FAHD1Q6P587 224 aa13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 OR6V1Q8N148 313 aa13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 OR2T33Q8NG76 320 aa13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 TEX47Q8TBZ9 253 aa13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 IGFBPL1Q8WX77 278 aa13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 TFAP2CQ92754 450 aa13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 NINJ1Q92982 152 aa13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 SNX18Q96RF0 628 aa13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 MBOAT4Q96T53 435 aa13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 DDOQ99489 341 aa13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 ZNF416Q9BWM5 594 aa13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 SRA1Q9HD15 236 aaKnown RBP13.07□□□□□ -0.32
SMPDL3A-201ENST00000368440 OSMP13725 252 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 MSR1P21757 451 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 POU1F1P28069 291 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 POLR2IP36954 125 aaKnown RBP13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 CAPGP40121 348 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 HGFACQ04756 655 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 TMEM53Q6P2H8 277 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 SLC37A3Q8NCC5 494 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 SMAP2Q8WU79 429 aaPredicted RBP13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 CCL19Q99731 98 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 GABARAPL1Q9H0R8 117 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 ZNF556Q9HAH1 456 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 KRT84Q9NSB2 600 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 USE1Q9NZ43 259 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 B9D1Q9UPM9 204 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 FAM171A2A8MVW0 826 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 CST2P09228 141 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 GAAP10253 952 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 CCL2P13500 99 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 CRMP1Q14194 572 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 MEP1BQ16820 701 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 PABPC1L2AQ5JQF8 200 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 KRT80Q6KB66 452 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 ACSM5Q6NUN0 579 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 GLB1L2Q8IW92 636 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 DEPDC4Q8N2C3 294 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 AKR7LQ8NHP1 331 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 ZNRF4Q8WWF5 429 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 KCNS3Q9BQ31 491 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 CCNB1IP1Q9NPC3 277 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 LAMP3Q9UQV4 416 aa13.06□□□□□ -0.32
SMPDL3A-201ENST00000368440 SERPINA5P05154 406 aa13.05□□□□□ -0.32
SMPDL3A-201ENST00000368440 CRABP1P29762 137 aa13.05□□□□□ -0.32
SMPDL3A-201ENST00000368440 CENPAP49450 140 aa13.05□□□□□ -0.32
SMPDL3A-201ENST00000368440 RAD23AP54725 363 aa13.05□□□□□ -0.32
SMPDL3A-201ENST00000368440 KDM4DQ6B0I6 523 aa13.05□□□□□ -0.32
SMPDL3A-201ENST00000368440 DPPA2Q7Z7J5 298 aa13.05□□□□□ -0.32
SMPDL3A-201ENST00000368440 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.05□□□□□ -0.32
SMPDL3A-201ENST00000368440 ZBTB46Q86UZ6 589 aa13.05□□□□□ -0.32
SMPDL3A-201ENST00000368440 PAQR4Q8N4S7 273 aaPredicted RBP13.05□□□□□ -0.32
SMPDL3A-201ENST00000368440 CPEB3Q8NE35 698 aaKnown RBP13.05□□□□□ -0.32
SMPDL3A-201ENST00000368440 ZNF555Q8NEP9 628 aa13.05□□□□□ -0.32
SMPDL3A-201ENST00000368440 OR9Q1Q8NGQ5 310 aa13.05□□□□□ -0.32
SMPDL3A-201ENST00000368440 C11orf40Q8WZ69 217 aa13.05□□□□□ -0.32
SMPDL3A-201ENST00000368440 DHRS9Q9BPW9 319 aa13.05□□□□□ -0.32
SMPDL3A-201ENST00000368440 RACGAP1Q9H0H5 632 aa13.05□□□□□ -0.32
SMPDL3A-201ENST00000368440 KCNN2Q9H2S1 579 aa13.05□□□□□ -0.32
SMPDL3A-201ENST00000368440 PAPOLBQ9NRJ5 636 aaKnown RBP13.05□□□□□ -0.32
SMPDL3A-201ENST00000368440 BAIAP2Q9UQB8 552 aa13.05□□□□□ -0.32
SMPDL3A-201ENST00000368440 PLCE1Q9P212 2302 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 CD8AP01732 235 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 ZNF35P13682 527 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 APEX1P27695 318 aaKnown RBP13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 PYCR1P32322 319 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 GRK5P34947 590 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 GUCA1AP43080 201 aaPredicted RBP13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 PSG4Q00888 419 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 GINS1Q14691 196 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 DEFB113Q30KQ7 82 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 TMEM236Q5W0B7 351 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 DNM1P34Q6PK57 102 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 VHLLQ6RSH7 139 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 MBD6Q96DN6 1003 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 ANKRD60Q9BZ19 345 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 OR2H1Q9GZK4 316 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 WNT5BQ9H1J7 359 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 FAM118AQ9NWS6 357 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 FKBP7Q9Y680 259 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 GYPBP06028 91 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 TTKP33981 857 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 FABP6P51161 128 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 ART1P52961 327 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 ADARB1P78563 741 aaKnown RBP13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 CDK5Q00535 292 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 HSF2Q03933 536 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 SLC27A4Q6P1M0 643 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 LYPD4Q6UWN0 246 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 SLC30A7Q8NEW0 376 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 OR51L1Q8NGJ5 315 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 NR1H4Q96RI1 486 aaPredicted RBP13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 TRAF4Q9BUZ4 470 aaPredicted RBP13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 HCAR1Q9BXC0 346 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 MED20Q9H944 212 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 CMC2Q9NRP2 79 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 CA10Q9NS85 328 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms