RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 WISP1O95388 367 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 SDHBP21912 280 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 ERP29P30040 261 aaKnown RBP12.54□□□□□ -0.4
USF1-202ENST00000368020 DGCR2P98153 550 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 MYBPHQ13203 477 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 MAB21L1Q13394 359 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 KLF9Q13886 244 aaPredicted RBP12.54□□□□□ -0.4
USF1-202ENST00000368020 FAM198BQ6UWH4 519 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 RHOUQ7L0Q8 258 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 SIAH3Q8IW03 269 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 OR10H5Q8NGA6 315 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 OR2Y1Q8NGV0 311 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 SMAD5Q99717 465 aaKnown RBP12.54□□□□□ -0.4
USF1-202ENST00000368020 CACNG6Q9BXT2 260 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 ULBP3Q9BZM4 244 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 ANKRD10Q9NXR5 420 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 KLHL13Q9P2N7 655 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 HHLA2Q9UM44 414 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 LRP12Q9Y561 859 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 LOC102725191A0A1B0GVB3 256 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 A0A1W2PQ72 361 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 C7orf66A4D0T2 115 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 C2orf72A6NCS6 295 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 H3BML4 177 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 IGHG1P01857 330 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 TCRBP04435 133 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 CD3GP09693 182 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 UBCP0CG48 685 aaKnown RBP12.54□□□□□ -0.4
USF1-202ENST00000368020 HLA-DOBP13765 273 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 ACHEP22303 614 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 BTCP35070 178 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 GDNFP39905 211 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 HES3Q5TGS1 186 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 TMEM244Q5VVB8 128 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 GLT8D1Q68CQ7 371 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 LCN10Q6JVE6 187 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 LRRC69Q6ZNQ3 347 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 OR56B4Q8NH76 319 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 DNAJA3Q96EY1 480 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 IMMP1LQ96LU5 166 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 OR2M2Q96R28 347 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 AMELYQ99218 206 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 RANGRFQ9HD47 186 aaPredicted RBP12.54□□□□□ -0.4
USF1-202ENST00000368020 NUDT15Q9NV35 164 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 TAS2R8Q9NYW2 309 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 STMN3Q9NZ72 180 aa12.54□□□□□ -0.4
USF1-202ENST00000368020 RBMX2Q9Y388 322 aaKnown RBP12.54□□□□□ -0.4
USF1-202ENST00000368020 PTRH2Q9Y3E5 179 aaKnown RBP12.54□□□□□ -0.4
USF1-202ENST00000368020 CHCHD2Q9Y6H1 151 aaPredicted RBP12.54□□□□□ -0.4
USF1-202ENST00000368020 AHCTF1Q8WYP5 2266 aa12.53□□□□□ -0.4
USF1-202ENST00000368020 CCDC187A0A096LP49 1063 aa12.53□□□□□ -0.4
USF1-202ENST00000368020 A0A1B0GVC2 190 aa12.53□□□□□ -0.4
USF1-202ENST00000368020 SPAARA0A1B0GVQ0 90 aa12.53□□□□□ -0.4
USF1-202ENST00000368020 A6NIN4 97 aa12.53□□□□□ -0.4
USF1-202ENST00000368020 SLC17A2O00624 439 aa12.53□□□□□ -0.4
USF1-202ENST00000368020 PRAF2O60831 178 aa12.53□□□□□ -0.4
USF1-202ENST00000368020 GPANK1O95872 356 aa12.53□□□□□ -0.4
USF1-202ENST00000368020 ADRA2CP18825 462 aa12.53□□□□□ -0.4
USF1-202ENST00000368020 FAUP35544 74 aaKnown RBP12.53□□□□□ -0.4
USF1-202ENST00000368020 RPS27P42677 84 aaKnown RBP12.53□□□□□ -0.4
USF1-202ENST00000368020 ELFN2Q5R3F8 820 aa12.53□□□□□ -0.4
USF1-202ENST00000368020 OR7E24Q6IFN5 339 aa12.53□□□□□ -0.4
USF1-202ENST00000368020 BTN2A1Q7KYR7 527 aa12.53□□□□□ -0.4
USF1-202ENST00000368020 RAB11FIP2Q7L804 512 aa12.53□□□□□ -0.4
USF1-202ENST00000368020 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.53□□□□□ -0.4
USF1-202ENST00000368020 NKAIN3Q8N8D7 197 aa12.53□□□□□ -0.4
USF1-202ENST00000368020 CAPSLQ8WWF8 208 aa12.53□□□□□ -0.4
USF1-202ENST00000368020 PHF21AQ96BD5 680 aa12.53□□□□□ -0.4
USF1-202ENST00000368020 SCMH1Q96GD3 660 aa12.53□□□□□ -0.4
USF1-202ENST00000368020 ZPBPQ9BS86 351 aa12.53□□□□□ -0.4
USF1-202ENST00000368020 DIABLOQ9NR28 239 aa12.53□□□□□ -0.4
USF1-202ENST00000368020 DMXL1Q9Y485 3027 aa12.52□□□□□ -0.4
USF1-202ENST00000368020 TRAV8-7A0A075B6U6 113 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 XRCC3O43542 346 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 TLX3O43711 291 aaPredicted RBP12.52□□□□□ -0.41
USF1-202ENST00000368020 C1QBP02746 253 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 MAS1P04201 325 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 COX6A1P12074 109 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 CCL4P13236 92 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 IL11P20809 199 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 STOMP27105 288 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 FOLR3P41439 243 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 MMP16P51512 607 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 NOVA1P51513 510 aaKnown RBP12.52□□□□□ -0.41
USF1-202ENST00000368020 SSR4P51571 173 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 AGFG1P52594 562 aaKnown RBP12.52□□□□□ -0.41
USF1-202ENST00000368020 NKX2-5P52952 324 aaPredicted RBP12.52□□□□□ -0.41
USF1-202ENST00000368020 BIDP55957 195 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 CLRN1P58418 232 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 SLC35A1P78382 337 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 CD83Q01151 205 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 SSBP1Q04837 148 aaKnown RBP12.52□□□□□ -0.41
USF1-202ENST00000368020 RAB11BQ15907 218 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 ETFDHQ16134 617 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 NDUFAF7Q7L592 441 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 DCXRQ7Z4W1 244 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 FGD2Q7Z6J4 655 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 PLCZ1Q86YW0 608 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 NOXO1Q8NFA2 376 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 POC1BQ8TC44 478 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms