RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 NDUFS8O00217 210 aa20.56■□□□□ 0.88
PFDN2-201ENST00000368010 ACOT8O14734 319 aa20.56■□□□□ 0.88
PFDN2-201ENST00000368010 SCG5P05408 212 aa20.56■□□□□ 0.88
PFDN2-201ENST00000368010 CDKN2AP42771 156 aaKnown RBP20.56■□□□□ 0.88
PFDN2-201ENST00000368010 SELENOVP59797 346 aa20.56■□□□□ 0.88
PFDN2-201ENST00000368010 SCRN3Q0VDG4 424 aa20.56■□□□□ 0.88
PFDN2-201ENST00000368010 OR2T5Q6IEZ7 315 aa20.56■□□□□ 0.88
PFDN2-201ENST00000368010 LRP11Q86VZ4 500 aa20.56■□□□□ 0.88
PFDN2-201ENST00000368010 JAZF1Q86VZ6 243 aa20.56■□□□□ 0.88
PFDN2-201ENST00000368010 GLB1L2Q8IW92 636 aa20.56■□□□□ 0.88
PFDN2-201ENST00000368010 ZCCHC24Q8N2G6 241 aaKnown RBP20.56■□□□□ 0.88
PFDN2-201ENST00000368010 OR2T29Q8NH02 315 aa20.56■□□□□ 0.88
PFDN2-201ENST00000368010 FOXN4Q96NZ1 517 aa20.56■□□□□ 0.88
PFDN2-201ENST00000368010 NUAK2Q9H093 628 aa20.56■□□□□ 0.88
PFDN2-201ENST00000368010 MS4A5Q9H3V2 200 aa20.56■□□□□ 0.88
PFDN2-201ENST00000368010 EIF3KQ9UBQ5 218 aaKnown RBP20.56■□□□□ 0.88
PFDN2-201ENST00000368010 REV1Q9UBZ9 1251 aa20.56■□□□□ 0.88
PFDN2-201ENST00000368010 COA3Q9Y2R0 106 aaPredicted RBP20.56■□□□□ 0.88
PFDN2-201ENST00000368010 SAMHD1Q9Y3Z3 626 aaKnown RBP20.56■□□□□ 0.88
PFDN2-201ENST00000368010 C5orf49A4QMS7 147 aa20.55■□□□□ 0.88
PFDN2-201ENST00000368010 IGFBP1P08833 259 aaPredicted RBP20.55■□□□□ 0.88
PFDN2-201ENST00000368010 RAP2AP10114 183 aa20.55■□□□□ 0.88
PFDN2-201ENST00000368010 NOS3P29474 1203 aa20.55■□□□□ 0.88
PFDN2-201ENST00000368010 CRABP1P29762 137 aa20.55■□□□□ 0.88
PFDN2-201ENST00000368010 CARTPTQ16568 116 aa20.55■□□□□ 0.88
PFDN2-201ENST00000368010 RPL13AP3Q6NVV1 102 aa20.55■□□□□ 0.88
PFDN2-201ENST00000368010 ZNF774Q6NX45 483 aa20.55■□□□□ 0.88
PFDN2-201ENST00000368010 UNQ6126/PRO20091Q6UXV3 157 aa20.55■□□□□ 0.88
PFDN2-201ENST00000368010 ICA1LQ8NDH6 482 aa20.55■□□□□ 0.88
PFDN2-201ENST00000368010 C11orf40Q8WZ69 217 aa20.55■□□□□ 0.88
PFDN2-201ENST00000368010 BTBD10Q9BSF8 475 aa20.55■□□□□ 0.88
PFDN2-201ENST00000368010 PIMREGQ9BSJ6 248 aa20.55■□□□□ 0.88
PFDN2-201ENST00000368010 TPK1Q9H3S4 243 aa20.55■□□□□ 0.88
PFDN2-201ENST00000368010 NDRG4Q9ULP0 352 aaKnown RBP20.55■□□□□ 0.88
PFDN2-201ENST00000368010 CDH10Q9Y6N8 788 aa20.55■□□□□ 0.88
PFDN2-201ENST00000368010 LOC100509620A0A075B734 347 aa20.54■□□□□ 0.88
PFDN2-201ENST00000368010 A0A096LNT2 108 aa20.54■□□□□ 0.88
PFDN2-201ENST00000368010 LOC390937A0A1W2PQ73 354 aa20.54■□□□□ 0.88
PFDN2-201ENST00000368010 AQP12BA6NM10 295 aa20.54■□□□□ 0.88
PFDN2-201ENST00000368010 RENP00797 406 aa20.54■□□□□ 0.88
PFDN2-201ENST00000368010 TP53P04637 393 aaPredicted RBP20.54■□□□□ 0.88
PFDN2-201ENST00000368010 ALDH3B1P43353 468 aa20.54■□□□□ 0.88
PFDN2-201ENST00000368010 ERVS71-1P61550 626 aa20.54■□□□□ 0.88
PFDN2-201ENST00000368010 PPP1R8Q12972 351 aaKnown RBP20.54■□□□□ 0.88
PFDN2-201ENST00000368010 MAD2L1BPQ15013 274 aaPredicted RBP20.54■□□□□ 0.88
PFDN2-201ENST00000368010 LEG1Q6P5S2 330 aa20.54■□□□□ 0.88
PFDN2-201ENST00000368010 AQP12AQ8IXF9 295 aa20.54■□□□□ 0.88
PFDN2-201ENST00000368010 AQP11Q8NBQ7 271 aa20.54■□□□□ 0.88
PFDN2-201ENST00000368010 OR52L1Q8NGH7 329 aa20.54■□□□□ 0.88
PFDN2-201ENST00000368010 OR1J1Q8NGS3 322 aa20.54■□□□□ 0.88
PFDN2-201ENST00000368010 SYNPRQ8TBG9 265 aa20.54■□□□□ 0.88
PFDN2-201ENST00000368010 SLC7A6OSQ96CW6 309 aaPredicted RBP20.54■□□□□ 0.88
PFDN2-201ENST00000368010 SNX18Q96RF0 628 aa20.54■□□□□ 0.88
PFDN2-201ENST00000368010 MYEF2Q9P2K5 600 aaKnown RBP20.54■□□□□ 0.88
PFDN2-201ENST00000368010 U3KQV3 271 aa20.54■□□□□ 0.88
PFDN2-201ENST00000368010 IDH3BO43837 385 aa20.53■□□□□ 0.88
PFDN2-201ENST00000368010 DAOP14920 347 aa20.53■□□□□ 0.88
PFDN2-201ENST00000368010 ZNF250P15622 560 aa20.53■□□□□ 0.88
PFDN2-201ENST00000368010 HIST1H1CP16403 213 aaKnown RBP20.53■□□□□ 0.88
PFDN2-201ENST00000368010 KLF3P57682 345 aaPredicted RBP20.53■□□□□ 0.88
PFDN2-201ENST00000368010 KRTAP1-1Q07627 177 aa20.53■□□□□ 0.88
PFDN2-201ENST00000368010 LOXL1Q08397 574 aaPredicted RBP20.53■□□□□ 0.88
PFDN2-201ENST00000368010 AQP6Q13520 282 aa20.53■□□□□ 0.88
PFDN2-201ENST00000368010 NKPD1Q17RQ9 610 aa20.53■□□□□ 0.88
PFDN2-201ENST00000368010 ZNF770Q6IQ21 691 aaPredicted RBP20.53■□□□□ 0.88
PFDN2-201ENST00000368010 ADGRG5Q8IZF4 528 aa20.53■□□□□ 0.88
PFDN2-201ENST00000368010 OR4K13Q8NH42 304 aa20.53■□□□□ 0.88
PFDN2-201ENST00000368010 NMNAT3Q96T66 252 aa20.53■□□□□ 0.88
PFDN2-201ENST00000368010 EGLN3Q9H6Z9 239 aa20.53■□□□□ 0.88
PFDN2-201ENST00000368010 VNN3Q9NY84 501 aa20.53■□□□□ 0.88
PFDN2-201ENST00000368010 GPR160Q9UJ42 338 aa20.53■□□□□ 0.88
PFDN2-201ENST00000368010 IGLV3-9A0A075B6K5 115 aa20.52■□□□□ 0.88
PFDN2-201ENST00000368010 DHRS12A0PJE2 317 aa20.52■□□□□ 0.88
PFDN2-201ENST00000368010 GASTP01350 101 aa20.52■□□□□ 0.88
PFDN2-201ENST00000368010 COX5BP10606 129 aa20.52■□□□□ 0.88
PFDN2-201ENST00000368010 HOXB4P17483 251 aaPredicted RBP20.52■□□□□ 0.88
PFDN2-201ENST00000368010 WNT5AP41221 380 aa20.52■□□□□ 0.88
PFDN2-201ENST00000368010 CENPAP49450 140 aa20.52■□□□□ 0.88
PFDN2-201ENST00000368010 LSM6P62312 80 aaKnown RBP20.52■□□□□ 0.88
PFDN2-201ENST00000368010 MICAQ29983 383 aa20.52■□□□□ 0.88
PFDN2-201ENST00000368010 CLEC12AQ5QGZ9 265 aa20.52■□□□□ 0.88
PFDN2-201ENST00000368010 PGM2L1Q6PCE3 622 aa20.52■□□□□ 0.88
PFDN2-201ENST00000368010 ZNF101Q8IZC7 436 aa20.52■□□□□ 0.88
PFDN2-201ENST00000368010 TSSK2Q96PF2 358 aa20.52■□□□□ 0.88
PFDN2-201ENST00000368010 CHID1Q9BWS9 393 aa20.52■□□□□ 0.88
PFDN2-201ENST00000368010 ASH2LQ9UBL3 628 aa20.52■□□□□ 0.88
PFDN2-201ENST00000368010 CSPG4Q6UVK1 2322 aa20.52■□□□□ 0.87
PFDN2-201ENST00000368010 NF1P21359 2839 aa20.51■□□□□ 0.87
PFDN2-201ENST00000368010 VWC2LB2RUY7 222 aa20.51■□□□□ 0.87
PFDN2-201ENST00000368010 SGCEO43556 437 aa20.51■□□□□ 0.87
PFDN2-201ENST00000368010 DOK2O60496 412 aa20.51■□□□□ 0.87
PFDN2-201ENST00000368010 DNAJC8O75937 253 aaPredicted RBP20.51■□□□□ 0.87
PFDN2-201ENST00000368010 MPZL1O95297 269 aa20.51■□□□□ 0.87
PFDN2-201ENST00000368010 CLPTM1O96005 669 aa20.51■□□□□ 0.87
PFDN2-201ENST00000368010 HOXB6P17509 224 aaKnown RBP20.51■□□□□ 0.87
PFDN2-201ENST00000368010 USF1P22415 310 aaPredicted RBP20.51■□□□□ 0.87
PFDN2-201ENST00000368010 PPP2R2BQ00005 443 aa20.51■□□□□ 0.87
PFDN2-201ENST00000368010 FLOT2Q14254 428 aa20.51■□□□□ 0.87
PFDN2-201ENST00000368010 GK3PQ14409 553 aa20.51■□□□□ 0.87
PFDN2-201ENST00000368010 OTPQ5XKR4 325 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms