RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 C11orf88Q6PI97 169 aa12.07□□□□□ -0.48
VAMP4-202ENST00000367740 PDZD9Q8IXQ8 264 aa12.07□□□□□ -0.48
VAMP4-202ENST00000367740 SLC35B4Q969S0 331 aa12.07□□□□□ -0.48
VAMP4-202ENST00000367740 R3HDM4Q96D70 268 aa12.07□□□□□ -0.48
VAMP4-202ENST00000367740 TEX37Q96LM6 180 aa12.07□□□□□ -0.48
VAMP4-202ENST00000367740 EPYCQ99645 322 aa12.07□□□□□ -0.48
VAMP4-202ENST00000367740 PPA2Q9H2U2 334 aa12.07□□□□□ -0.48
VAMP4-202ENST00000367740 ARMC7Q9H6L4 198 aa12.07□□□□□ -0.48
VAMP4-202ENST00000367740 CCNB1IP1Q9NPC3 277 aa12.07□□□□□ -0.48
VAMP4-202ENST00000367740 MAN2C1Q9NTJ4 1040 aa12.07□□□□□ -0.48
VAMP4-202ENST00000367740 CALML5Q9NZT1 146 aa12.07□□□□□ -0.48
VAMP4-202ENST00000367740 BTNL2Q9UIR0 455 aa12.07□□□□□ -0.48
VAMP4-202ENST00000367740 ZNF232Q9UNY5 417 aa12.07□□□□□ -0.48
VAMP4-202ENST00000367740 KITLGP21583 273 aa12.06□□□□□ -0.48
VAMP4-202ENST00000367740 MVDP53602 400 aa12.06□□□□□ -0.48
VAMP4-202ENST00000367740 KRTAP10-11P60412 298 aa12.06□□□□□ -0.48
VAMP4-202ENST00000367740 PSG4Q00888 419 aa12.06□□□□□ -0.48
VAMP4-202ENST00000367740 TAF11Q15544 211 aa12.06□□□□□ -0.48
VAMP4-202ENST00000367740 HIST3H3Q16695 136 aa12.06□□□□□ -0.48
VAMP4-202ENST00000367740 METTL11BQ5VVY1 283 aa12.06□□□□□ -0.48
VAMP4-202ENST00000367740 DCDC5Q6ZRR9 648 aa12.06□□□□□ -0.48
VAMP4-202ENST00000367740 ZNF572Q7Z3I7 529 aaPredicted RBP12.06□□□□□ -0.48
VAMP4-202ENST00000367740 CNPY4Q8N129 248 aa12.06□□□□□ -0.48
VAMP4-202ENST00000367740 TRIML2Q8N7C3 387 aa12.06□□□□□ -0.48
VAMP4-202ENST00000367740 OR5J2Q8NH18 312 aa12.06□□□□□ -0.48
VAMP4-202ENST00000367740 PPP1R35Q8TAP8 253 aa12.06□□□□□ -0.48
VAMP4-202ENST00000367740 SLC38A5Q8WUX1 472 aa12.06□□□□□ -0.48
VAMP4-202ENST00000367740 DNAJA4Q8WW22 397 aaPredicted RBP12.06□□□□□ -0.48
VAMP4-202ENST00000367740 MCHR2Q969V1 340 aa12.06□□□□□ -0.48
VAMP4-202ENST00000367740 ZNF347Q96SE7 839 aa12.06□□□□□ -0.48
VAMP4-202ENST00000367740 ZNF607Q96SK3 696 aa12.06□□□□□ -0.48
VAMP4-202ENST00000367740 MKS1Q9NXB0 559 aa12.06□□□□□ -0.48
VAMP4-202ENST00000367740 GAR1Q9NY12 217 aaKnown RBP12.06□□□□□ -0.48
VAMP4-202ENST00000367740 PCDHGB5Q9Y5G0 923 aa12.06□□□□□ -0.48
VAMP4-202ENST00000367740 ADARB2-AS1A8MUL3 147 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 LIPFP07098 398 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 FBP1P09467 338 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 ETFAP13804 333 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 PSMB10P40306 273 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 CCT5P48643 541 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 ERFP50548 548 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 ZNF84P51523 738 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 PDCD4Q53EL6 469 aaKnown RBP12.05□□□□□ -0.48
VAMP4-202ENST00000367740 ZBTB37Q5TC79 503 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 FAM91A1Q658Y4 838 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 PGBD2Q6P3X8 592 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 COMTD1Q86VU5 262 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 C10orf53Q8N6V4 93 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 OR4F17Q8NGA8 305 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 NABP1Q96AH0 204 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 TMEM19Q96HH6 336 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 MEGF10Q96KG7 1140 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 MAGEB18Q96M61 343 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 TECTBQ96PL2 329 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 OR4F4Q96R69 305 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 PANX1Q96RD7 426 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 ELOVL3Q9HB03 270 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 CTSZQ9UBR2 303 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 IFT52Q9Y366 437 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 FAM96BQ9Y3D0 163 aa12.05□□□□□ -0.48
VAMP4-202ENST00000367740 E9PBE3 544 aa12.04□□□□□ -0.48
VAMP4-202ENST00000367740 OPN1SWP03999 348 aa12.04□□□□□ -0.48
VAMP4-202ENST00000367740 GSTM3P21266 225 aa12.04□□□□□ -0.48
VAMP4-202ENST00000367740 CDAP32320 146 aa12.04□□□□□ -0.48
VAMP4-202ENST00000367740 CRATP43155 626 aa12.04□□□□□ -0.48
VAMP4-202ENST00000367740 KIR2DS4P43632 304 aa12.04□□□□□ -0.48
VAMP4-202ENST00000367740 ARHGDIAP52565 204 aa12.04□□□□□ -0.48
VAMP4-202ENST00000367740 CLRN1P58418 232 aa12.04□□□□□ -0.48
VAMP4-202ENST00000367740 ERVK-25P63136 954 aa12.04□□□□□ -0.48
VAMP4-202ENST00000367740 DPY19L1Q2PZI1 675 aa12.04□□□□□ -0.48
VAMP4-202ENST00000367740 ULK3Q6PHR2 472 aa12.04□□□□□ -0.48
VAMP4-202ENST00000367740 ZNF621Q6ZSS3 439 aa12.04□□□□□ -0.48
VAMP4-202ENST00000367740 NOXO1Q8NFA2 376 aa12.04□□□□□ -0.48
VAMP4-202ENST00000367740 OR10AD1Q8NGE0 317 aa12.04□□□□□ -0.48
VAMP4-202ENST00000367740 C4orf45Q96LM5 186 aa12.04□□□□□ -0.48
VAMP4-202ENST00000367740 WNT5BQ9H1J7 359 aa12.04□□□□□ -0.48
VAMP4-202ENST00000367740 SIAEQ9HAT2 523 aa12.04□□□□□ -0.48
VAMP4-202ENST00000367740 CACYBPQ9HB71 228 aaKnown RBP12.04□□□□□ -0.48
VAMP4-202ENST00000367740 TAS2R5Q9NYW4 299 aa12.04□□□□□ -0.48
VAMP4-202ENST00000367740 U3KQK5 164 aa12.04□□□□□ -0.48
VAMP4-202ENST00000367740 A0A0G2JPF8 293 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 IGHV3-64DA0A0J9YX35 117 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 HNRNPCL2B2RXH8 293 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 HNRNPCL3B7ZW38 293 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 COPEO14579 308 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 RIPK2O43353 540 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 HNRNPCL1O60812 293 aaKnown RBP12.03□□□□□ -0.48
VAMP4-202ENST00000367740 FBXO24O75426 580 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 MT-ATP6P00846 226 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 IGHG1P01857 330 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 HNRNPCL4P0DMR1 293 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 CD33P20138 364 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 ALDH3A1P30838 453 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 S100A3P33764 101 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 MSX2P35548 267 aaPredicted RBP12.03□□□□□ -0.48
VAMP4-202ENST00000367740 ETV4P43268 484 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 NPY4RP50391 375 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 MRPS34P82930 218 aaKnown RBP12.03□□□□□ -0.48
VAMP4-202ENST00000367740 EMX1Q04741 257 aaPredicted RBP12.03□□□□□ -0.48
VAMP4-202ENST00000367740 ZNF181Q2M3W8 571 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms