RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 DND1Q8IYX4 353 aaKnown RBP10.52□□□□□ -0.72
SYNE1-204ENST00000367248 STOML3Q8TAV4 291 aa10.52□□□□□ -0.72
SYNE1-204ENST00000367248 LGALS14Q8TCE9 139 aa10.52□□□□□ -0.72
SYNE1-204ENST00000367248 ALKBH3Q96Q83 286 aaPredicted RBP10.52□□□□□ -0.72
SYNE1-204ENST00000367248 PRMT8Q9NR22 394 aaPredicted RBP10.52□□□□□ -0.72
SYNE1-204ENST00000367248 FKBP14Q9NWM8 211 aa10.52□□□□□ -0.72
SYNE1-204ENST00000367248 CD300LBA8K4G0 201 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 HOXB3P14651 431 aaPredicted RBP10.52□□□□□ -0.73
SYNE1-204ENST00000367248 ZNF93P35789 620 aaPredicted RBP10.52□□□□□ -0.73
SYNE1-204ENST00000367248 OR4D9Q8NGE8 314 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 OR51D1Q8NGF3 324 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 NKX3-1Q99801 234 aaPredicted RBP10.52□□□□□ -0.73
SYNE1-204ENST00000367248 DHHO43323 396 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 NXPH3O95157 252 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 GAAP10253 952 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 ADH6P28332 368 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 LYPD8Q6UX82 237 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 TMEM99Q8N816 258 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 FNDC9Q8TBE3 224 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 ZBTB8AQ96BR9 441 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 PPA2Q9H2U2 334 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 UBTD1Q9HAC8 227 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 CLEC2DQ9UHP7 191 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 A0A0G2JMP0 313 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 ACER2Q5QJU3 275 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 PRSS41Q7RTY9 318 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 BPIFB2Q8N4F0 458 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 AMER3Q8N944 861 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 OR4M2Q8NGB6 313 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 RAB3CQ96E17 227 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 NRTNQ99748 197 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 TXNIPQ9H3M7 391 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 FAM60AQ9NP50 221 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 LHX9Q9NQ69 397 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 HDGFL3Q9Y3E1 203 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 I3L521 148 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 HYAL3O43820 417 aaPredicted RBP10.52□□□□□ -0.73
SYNE1-204ENST00000367248 SERPINA7P05543 415 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 EIF4EP06730 217 aaKnown RBP10.52□□□□□ -0.73
SYNE1-204ENST00000367248 IL7P13232 177 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 BLVRBP30043 206 aaPredicted RBP10.52□□□□□ -0.73
SYNE1-204ENST00000367248 LIPAP38571 399 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 ZNF628Q5EBL2 1059 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 RHBDD2Q6NTF9 364 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 OVCH1Q7RTY7 1134 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 FBXL14Q8N1E6 418 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 CPEB3Q8NE35 698 aaKnown RBP10.52□□□□□ -0.73
SYNE1-204ENST00000367248 GABARAPL3Q9BY60 117 aa10.52□□□□□ -0.73
SYNE1-204ENST00000367248 MARF1Q9Y4F3 1742 aaKnown RBP10.52□□□□□ -0.73
SYNE1-204ENST00000367248 ZAR1LA6NP61 321 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 ZNF254O75437 659 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 LAP3P28838 519 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 SOX18P35713 384 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 SLC14A1Q13336 389 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 MRPL41Q8IXM3 137 aaKnown RBP10.51□□□□□ -0.73
SYNE1-204ENST00000367248 C12orf45Q8N5I9 185 aaPredicted RBP10.51□□□□□ -0.73
SYNE1-204ENST00000367248 OR2V1Q8NHB1 315 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 CENPOQ9BU64 300 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 EHFQ9NZC4 300 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 NCR1O76036 304 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 FTH1P19P0C7X4 201 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 LAMB2P55268 1798 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 AADACL3Q5VUY0 350 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 DOK3Q7L591 496 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 CXorf67Q86X51 503 aaPredicted RBP10.51□□□□□ -0.73
SYNE1-204ENST00000367248 NKAIN3Q8N8D7 197 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 OR10G3Q8NGC4 313 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 ZFAND1Q8TCF1 268 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 STK35Q8TDR2 534 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 GPR173Q9NS66 373 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 A0A1W2PPC1 479 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 D6RAR5 112 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 POU3F3P20264 500 aaPredicted RBP10.51□□□□□ -0.73
SYNE1-204ENST00000367248 MESP2Q0VG99 397 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 FGFBP1Q14512 234 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 NKG7Q16617 165 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 PLA1AQ53H76 456 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 TMEM81Q6P7N7 255 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 SLAMF6Q96DU3 332 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 TMEM246Q9BRR3 403 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 OCEL1Q9H607 264 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 SPAG17Q6Q759 2223 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 UBBP0CG47 229 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 RPS27P42677 84 aaKnown RBP10.51□□□□□ -0.73
SYNE1-204ENST00000367248 SECTM1Q8WVN6 248 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 DUSP15Q9H1R2 295 aaPredicted RBP10.51□□□□□ -0.73
SYNE1-204ENST00000367248 ACOXLQ9NUZ1 547 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 FAIMQ9NVQ4 179 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 GPR55Q9Y2T6 319 aaPredicted RBP10.51□□□□□ -0.73
SYNE1-204ENST00000367248 GOSR2O14653 212 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 GABARAPO95166 117 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 TBXA2RP21731 343 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 RAE1P78406 368 aaKnown RBP10.51□□□□□ -0.73
SYNE1-204ENST00000367248 HYLS1Q96M11 299 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 MMP28Q9H239 520 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 SLC25A19Q9HC21 320 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 LOC107986453A0A1B0GWG9 222 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 A0A1W2PPH5 198 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 FUOMA2VDF0 154 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 ANKUB1A6NFN9 424 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms