RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 TET1Q8NFU7 2136 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 FRG2CA6NGY1 282 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 SLC25A1P53007 311 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 PRICKLE2Q7Z3G6 844 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 KCNE4Q8WWG9 221 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 PIGCQ92535 297 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 ZNF814B7Z6K7 855 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 PRAMEF4O60810 478 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 GPX5O75715 221 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 DBHP09172 617 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 RFLNAQ6ZTI6 216 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 RHBDD1Q8TEB9 315 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 INTS12Q96CB8 462 aaKnown RBP11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 OPALINQ96PE5 141 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 HINT2Q9BX68 163 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 HRH4Q9H3N8 390 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 CASP8AP2Q9UKL3 1982 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 APEHP13798 732 aaKnown RBP11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 ZNF136P52737 540 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 EEF1A2Q05639 463 aaKnown RBP11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 AQP6Q13520 282 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 CDKN3Q16667 212 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 SLC7A5P1Q8MH63 180 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 HLA-CQ95604 372 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 DNAJA3Q96EY1 480 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 SDK2Q58EX2 2172 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 RAD1O60671 282 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 ABHD16AO95870 558 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 PDGFAP04085 211 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 RNF32Q9H0A6 362 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 SBF1O95248 1867 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 XRCC3O43542 346 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 EPHA1P21709 976 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 LBX1P52954 281 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 SQSTM1Q13501 440 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 CCSMST1Q4G0I0 132 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 AADACL3Q5VUY0 350 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 DCXRQ7Z4W1 244 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 OR4N2Q8NGD1 307 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 PLEKHF2Q9H8W4 249 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 FGF22Q9HCT0 170 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 ZNF223Q9UK11 482 aaPredicted RBP11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 KPTNQ9Y664 436 aa11.01□□□□□ -0.65
CDC42BPA-203ENST00000366766 CEBPZOSA8MTT3 80 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 MPPED1O15442 326 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 ARRB2P32121 409 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 OR1S2Q8NGQ3 325 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 TBC1D29Q9UFV1 150 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 CDC14CA4D256 554 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 POU2F2P09086 479 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 ESPNLQ6ZVH7 1005 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 C12orf10Q9HB07 376 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 NOSIPQ9Y314 301 aaKnown RBP11□□□□□ -0.65
CDC42BPA-203ENST00000366766 LRRC30A6NM36 301 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 ADRA2CP18825 462 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 DUSP1P28562 367 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 UBE2KP61086 200 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 IKZF1Q13422 519 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 ARSJQ5FYB0 599 aaPredicted RBP11□□□□□ -0.65
CDC42BPA-203ENST00000366766 LIPNQ5VXI9 398 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 BCORP1Q8N888 145 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 CTRCQ99895 268 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 OBP2BQ9NPH6 170 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 POLDIP2Q9Y2S7 368 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 MEIS3P1A6NDR6 274 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 HIST1H1CP16403 213 aaKnown RBP11□□□□□ -0.65
CDC42BPA-203ENST00000366766 CTF1Q16619 201 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 PFN4Q8NHR9 129 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 IL1F10Q8WWZ1 152 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 Q96M85 177 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 PLK3Q9H4B4 646 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 ACKR4Q9NPB9 350 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 PIGLQ9Y2B2 252 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 LOC107986453A0A1B0GWG9 222 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 PMPCAQ10713 525 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 SLC9A3R2Q15599 337 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 AVPI1Q5T686 147 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 DPPA2Q7Z7J5 298 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 STRAPQ9Y3F4 350 aaKnown RBP11□□□□□ -0.65
CDC42BPA-203ENST00000366766 PCDHGA1Q9Y5H4 931 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 SPINT2O43291 252 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 TMPRSS11DO60235 418 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 IAH1Q2TAA2 248 aaPredicted RBP11□□□□□ -0.65
CDC42BPA-203ENST00000366766 MOB3CQ70IA8 216 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 KANSL1Q7Z3B3 1105 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 DTWD2Q8NBA8 298 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 ATP13A2Q9NQ11 1180 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 RPS23P62266 143 aaKnown RBP11□□□□□ -0.65
CDC42BPA-203ENST00000366766 AGBL4Q5VU57 503 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 SLC5A6Q9Y289 635 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 ADAM10O14672 748 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 CSF3P09919 207 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 SNU13P55769 128 aaKnown RBP11□□□□□ -0.65
CDC42BPA-203ENST00000366766 RAB4BP61018 213 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 CCDC190Q86UF4 302 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 LIPHQ8WWY8 451 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 CORO2AQ92828 525 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 RASD2Q96D21 266 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 DOCK6Q96HP0 2047 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 OR6C1Q96RD1 312 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms