RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 ICAM2P13598 275 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 A8MXE2 369 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 GABRR1P24046 479 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 ZNF542PQ5EBM4 170 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 ARRDC1Q8N5I2 433 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 SIRT6Q8N6T7 355 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 PLPP7Q8NBV4 271 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 UQCC2Q9BRT2 126 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 STARD5Q9NSY2 213 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 SIX6O95475 246 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 ZNF728P0DKX0 622 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 F2RL1P55085 397 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 DEFA6Q01524 100 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 PNLIPRP3Q17RR3 467 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 NLRC3Q7RTR2 1065 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 NAXEQ8NCW5 288 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 OR51A2Q8NGJ7 313 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 TM7SF3Q9NS93 570 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 GHRLQ9UBU3 117 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 EIF4EBP2Q13542 120 aaPredicted RBP10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 GALNT16Q8N428 558 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 OR52H1Q8NGJ2 320 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 IL21Q9HBE4 155 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 ATXN7L1Q9ULK2 861 aaPredicted RBP10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 SIGLEC7Q9Y286 467 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 STRAPQ9Y3F4 350 aaKnown RBP10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 TRPM7Q96QT4 1865 aa10.78□□□□□ -0.68
CDC42BPA-202ENST00000366764 RFPL4AA6NLU0 287 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 RFPL4AL1F8VTS6 287 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 SNRNP70P08621 437 aaKnown RBP10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 SERPINA2P20848 420 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 EBPQ15125 230 aaKnown RBP10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 THEM4Q5T1C6 240 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 FAM57BQ71RH2 274 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 PRR22Q8IZ63 422 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 PPP1R35Q8TAP8 253 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 PRMT8Q9NR22 394 aaPredicted RBP10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 KCNIP2Q9NS61 270 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 FER1L5A0AVI2 2057 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 ABCA7Q8IZY2 2146 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 A0A0B4J2A0 478 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 IGHA1P01876 353 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 RAD52P43351 418 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 MKXQ8IYA7 352 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 PRR14Q9BWN1 585 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 NECAP2Q9NVZ3 263 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 SHPKQ9UHJ6 478 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 SLC17A2O00624 439 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 FBXO24O75426 580 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 BLVRBP30043 206 aaPredicted RBP10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 LCN10Q6JVE6 187 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 KANSL1Q7Z3B3 1105 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 ADGRG3Q86Y34 549 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 LGI3Q8N145 548 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 RBMXL1Q96E39 390 aaKnown RBP10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 S1PR5Q9H228 398 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 ERVMER34-1Q9H9K5 563 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 FOXJ3Q9UPW0 622 aa10.77□□□□□ -0.68
CDC42BPA-202ENST00000366764 ERVFC1P60507 584 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 KCNJ15Q99712 375 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 A6NL46 340 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 H3BQ06 376 aaPredicted RBP10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 WBP2Q969T9 261 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 ZCCHC4Q9H5U6 513 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 CHST11Q9NPF2 352 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 ZNF629Q9UEG4 869 aaPredicted RBP10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 SLC23A1Q9UHI7 598 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 CA3P07451 260 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 RIN1Q13671 783 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 LYG2Q86SG7 212 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 OR14L1PQ8NHC6 308 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 YIPF5Q969M3 257 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 SGK3Q96BR1 496 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 PLEKHA2Q9HB19 425 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 SPACA1Q9HBV2 294 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 MCTS1Q9ULC4 181 aaKnown RBP10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 ZNF74Q16587 644 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 TRMT12Q53H54 448 aaKnown RBP10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 ZNF485Q8NCK3 441 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 ASB16Q96NS5 453 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 REV1Q9UBZ9 1251 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 OR6C76A6NM76 312 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 H7C1C5 153 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 M0QYG6 137 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 RAB6AP20340 208 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 CD79BP40259 229 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 LCN6P62502 163 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 BEND4Q6ZU67 534 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 C12orf10Q9HB07 376 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 TAF9BQ9HBM6 251 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 VWA8A3KMH1 1905 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 DOCK9Q9BZ29 2069 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 FCMRO60667 390 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 NPSR1Q6W5P4 371 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 EXD3Q8N9H8 876 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 ISG20L2Q9H9L3 353 aaKnown RBP10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 PCDHB10Q9UN67 800 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 SLC5A6Q9Y289 635 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 ADAM18Q9Y3Q7 739 aa10.77□□□□□ -0.69
CDC42BPA-202ENST00000366764 CTDSPLO15194 276 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms