RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 FOLR1P15328 257 aa18.51■□□□□ 0.55
CDC42BPB-201ENST00000361246 FAM71E1Q6IPT2 247 aa18.51■□□□□ 0.55
CDC42BPB-201ENST00000361246 CAMKMTQ7Z624 323 aa18.51■□□□□ 0.55
CDC42BPB-201ENST00000361246 CMTM2Q8TAZ6 248 aa18.51■□□□□ 0.55
CDC42BPB-201ENST00000361246 SDF2Q99470 211 aa18.51■□□□□ 0.55
CDC42BPB-201ENST00000361246 FBXL4Q9UKA2 621 aa18.51■□□□□ 0.55
CDC42BPB-201ENST00000361246 TARM1B6A8C7 271 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 CRYZL1O95825 349 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 CD14P08571 375 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 TEAD1P28347 426 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 RPS23P62266 143 aaKnown RBP18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 MFGE8Q08431 387 aaPredicted RBP18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 RTL6Q6ICC9 239 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 DPPA2Q7Z7J5 298 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 ABHD11Q8NFV4 315 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 SLC7A13Q8TCU3 470 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 ALKBH3Q96Q83 286 aaPredicted RBP18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 SH2D1BO14796 132 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 CGB2Q6NT52 195 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 L3MBTL4Q8NA19 623 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 FAM213BQ8TBF2 198 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 PFDN5Q99471 154 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 NRIP3Q9NQ35 241 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 ACOXLQ9NUZ1 547 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 COPS3Q9UNS2 423 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 PKD1L3Q7Z443 1732 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 GPR137BO60478 399 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 UPK1BO75841 260 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 C3AR1Q16581 482 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 YOD1Q5VVQ6 348 aaPredicted RBP18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 OR51A4Q8NGJ6 313 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 OR51A2Q8NGJ7 313 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 TIAM2Q8IVF5 1701 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 A0A1W2PS29 197 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 UBALD1Q8TB05 177 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 OR6C76A6NM76 312 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 HIST1H1CP16403 213 aaKnown RBP18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 MC2RQ01718 297 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 ZNF454Q8N9F8 522 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 C1orf123Q9NWV4 160 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 FBXO7Q9Y3I1 522 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 LAX1Q8IWV1 398 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 OR51D1Q8NGF3 324 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 SLC39A7Q92504 469 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 ARL11Q969Q4 196 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 INPP5EQ9NRR6 644 aa18.5■□□□□ 0.55
CDC42BPB-201ENST00000361246 K7EPK0 472 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 CSF3P09919 207 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 CLN3Q13286 438 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 SPCS2Q15005 226 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 PDCD1Q15116 288 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 ZNF385BQ569K4 471 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 C5orf46Q6UWT4 87 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 FAM71E2Q8N5Q1 922 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 TMEM43Q9BTV4 400 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 NECAP2Q9NVZ3 263 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 GLI3P10071 1580 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 C17orf112F2Z3M2 114 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 SELEP16581 610 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 HNRNPFP52597 415 aaKnown RBP18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 RGS7BPQ6MZT1 257 aaPredicted RBP18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 OR1J1Q8NGS3 322 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 SYT11Q9BT88 431 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 ZFP57Q9NU63 452 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 HMGN4O00479 90 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 SPRED3Q2MJR0 410 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 RPL3LQ92901 407 aaKnown RBP18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 SLAMF6Q96DU3 332 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 TPT1P13693 172 aaKnown RBP18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 ARR3P36575 388 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 KCNJ16Q9NPI9 418 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 NME2P22392 152 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 IHHQ14623 411 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 MPPED2Q15777 294 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 S100A7AQ86SG5 101 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 ZNF546Q86UE3 836 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 MRPS24Q96EL2 167 aaKnown RBP18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 MRI1Q9BV20 369 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 NMES1Q9C002 83 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 TIMM10BQ9Y5J6 103 aa18.49■□□□□ 0.55
CDC42BPB-201ENST00000361246 SERTM2A0A1B0GWG4 89 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 TMEM82A0PJX8 343 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 SMLR1H3BR10 107 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 GPR37O15354 613 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 RGS11O94810 467 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 CD22P20273 847 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 COL9A1P20849 921 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 AADACP22760 399 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 PRAMEF5Q5TYX0 476 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 PRAMEF6Q5VXH4 476 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 POFUT1Q9H488 388 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 PATE3B3GLJ2 98 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 NUPL2O15504 423 aaKnown RBP18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 SRP9P49458 86 aaKnown RBP18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 GPM6AP51674 278 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 PCBP3P57721 371 aaKnown RBP18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 SPINK14Q6IE38 97 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 FBXW5Q969U6 566 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 SAMD10Q9BYL1 202 aa18.48■□□□□ 0.55
CDC42BPB-201ENST00000361246 CORINQ9Y5Q5 1042 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms