RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 SNIP1Q8TAD8 396 aaKnown RBP12.43□□□□□ -0.42
CSNK1E-201ENST00000359867 ZNRF4Q8WWF5 429 aa12.43□□□□□ -0.42
CSNK1E-201ENST00000359867 RFT1Q96AA3 541 aa12.43□□□□□ -0.42
CSNK1E-201ENST00000359867 IP6K3Q96PC2 410 aa12.43□□□□□ -0.42
CSNK1E-201ENST00000359867 MED28Q9H204 178 aa12.43□□□□□ -0.42
CSNK1E-201ENST00000359867 CCDC86Q9H6F5 360 aaKnown RBP12.43□□□□□ -0.42
CSNK1E-201ENST00000359867 BEX1Q9HBH7 125 aa12.43□□□□□ -0.42
CSNK1E-201ENST00000359867 RYDENQ9NUL5 291 aaKnown RBP12.43□□□□□ -0.42
CSNK1E-201ENST00000359867 ADAM30Q9UKF2 790 aa12.43□□□□□ -0.42
CSNK1E-201ENST00000359867 A0A1W2PPK0 400 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 OGG1O15527 345 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 SLC19A2O60779 497 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 NDUFS6O75380 124 aaKnown RBP12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 BTF3P20290 206 aaKnown RBP12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 SLC3A1Q07837 685 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 MESTQ5EB52 335 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 SLC25A53Q5H9E4 307 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 ZNF468Q5VIY5 522 aaPredicted RBP12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 LRFN4Q6PJG9 635 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 SLC16A9Q7RTY1 509 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 OR11H7Q8NGC8 314 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 SNX33Q8WV41 574 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 INTS12Q96CB8 462 aaKnown RBP12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 SLC25A36Q96CQ1 311 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 FER1L6-AS2Q96M78 137 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 KLRF1Q9NZS2 232 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 PPP4R1LQ9P1A2 415 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 MGAT4AQ9UM21 535 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 ANKRD11Q6UB99 2663 aaPredicted RBP12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 ZNF208O43345 1280 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 PYCR1P32322 319 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 BTCP35070 178 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 EIF2S3P41091 472 aaKnown RBP12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 NAA10P41227 235 aaPredicted RBP12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 MTNR1BP49286 362 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 AIMP2Q13155 320 aaKnown RBP12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 SLC25A35Q3KQZ1 300 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 BICRALQ6AI39 1079 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 SYT9Q86SS6 491 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 OR13C5Q8NGS8 318 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 THAP4Q8WY91 577 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 HSD17B8Q92506 261 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 CREB3L1Q96BA8 519 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 SPACA9Q96E40 222 aaPredicted RBP12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 LINC00052Q96N35 136 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 MNTQ99583 582 aa12.42□□□□□ -0.42
CSNK1E-201ENST00000359867 TRAV20A0A0B4J274 112 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 RPS10-NUDT3A0A1W2PQS6 291 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 LINC00587B1AMM8 73 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 PRSS44E7EML9 344 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 SELENOFO60613 162 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 WISP1O95388 367 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 IGHMP01871 453 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 CD3GP09693 182 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 CXCL3P19876 107 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 SLC6A1P30531 599 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 GRPRP30550 384 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 ACVR1BP36896 505 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 PTGDSP41222 190 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 AKR1D1P51857 326 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 HCCSP53701 268 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 MLF1P58340 268 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 DEFB109BQ30KR1 87 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 OR5M10Q6IEU7 315 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 CORO6Q6QEF8 472 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 ESPNLQ6ZVH7 1005 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 SPACA3Q8IXA5 215 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 BEST4Q8NFU0 473 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 OR10G3Q8NGC4 313 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 ZNF431Q8TF32 576 aaPredicted RBP12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 ABHD1Q96SE0 405 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 METTL7AQ9H8H3 244 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 MED11Q9P086 117 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 ST6GALNAC2Q9UJ37 374 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 PCDHGA9Q9Y5G4 932 aaKnown RBP12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 KLF2Q9Y5W3 355 aaPredicted RBP12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 WIF1Q9Y5W5 379 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 EML6Q6ZMW3 1958 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 C2orf72A6NCS6 295 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 ZNF891A8MT65 544 aaPredicted RBP12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 PLPP3O14495 311 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 TP53I11O14683 189 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 OR6A2O95222 327 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 SERPINA3P01011 423 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 RPL27P61353 136 aaKnown RBP12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 PLA1AQ53H76 456 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 ACER2Q5QJU3 275 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 RPL22L1Q6P5R6 122 aaKnown RBP12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 TEX19Q8NA77 164 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 OR11H4Q8NGC9 324 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 MFSD8Q8NHS3 518 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 ABHD4Q8TB40 342 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 HAVCR2Q8TDQ0 301 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 DDIT4LQ96D03 193 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 PELI1Q96FA3 418 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 MS4A3Q96HJ5 214 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 MRGPRX4Q96LA9 322 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 PGLYRP3Q96LB9 341 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 HYLS1Q96M11 299 aa12.41□□□□□ -0.42
CSNK1E-201ENST00000359867 TXNIPQ9H3M7 391 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms