RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 KLHDC2Q9Y2U9 406 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 ZNF175Q9Y473 711 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 POLQO75417 2590 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 PHF3Q92576 2039 aaKnown RBP12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 LOC100506127A0A0U1RQW1 187 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 A0A1W2PPW3 197 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 TRIM64BA6NI03 449 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 METTL15A6NJ78 407 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 TMCC2O75069 709 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 SULT1C4O75897 302 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 AQP8O94778 261 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 TACSTD2P09758 323 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 CD53P19397 219 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 CELP19835 753 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 GABRA5P31644 462 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 ZNF84P51523 738 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 NCS1P62166 190 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 LSM3P62310 102 aaKnown RBP12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 AQP6Q13520 282 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 EIF2B1Q14232 305 aaKnown RBP12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 MEP1BQ16820 701 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 ZNF684Q5T5D7 378 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 KCTD18Q6PI47 426 aaPredicted RBP12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 SIAH3Q8IW03 269 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 GPR137CQ8N3F9 429 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 TEX19Q8NA77 164 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 KBTBD8Q8NFY9 601 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 FNDC9Q8TBE3 224 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 C11orf40Q8WZ69 217 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 PELI1Q96FA3 418 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 TAAR6Q96RI8 345 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 SEC61A2Q9H9S3 476 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 EXOSC4Q9NPD3 245 aaKnown RBP12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 FOXD3Q9UJU5 478 aaPredicted RBP12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 SSR3Q9UNL2 185 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 POLR1DQ9Y2S0 133 aa12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 NOSIPQ9Y314 301 aaKnown RBP12.25□□□□□ -0.45
PDLIM5-203ENST00000359265 SLC22A20A6NK97 555 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 ZNF724A8MTY0 619 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 DHHO43323 396 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 MPZL1O95297 269 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 OR8G3PP0DMU2 310 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 PSKH1P11801 424 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 RPS27P42677 84 aaKnown RBP12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 GUCA1AP43080 201 aaPredicted RBP12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 VBP1P61758 197 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 RPS25P62851 125 aaKnown RBP12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 SPCS2Q15005 226 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 TRAM1Q15629 374 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 KCNMB1Q16558 191 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 PCK2Q16822 640 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 CCDC58Q4VC31 144 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 ZNF787Q6DD87 383 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 LRFN4Q6PJG9 635 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 ARL9Q6T311 187 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 FOXL2NBQ6ZUU3 175 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 P4HA3Q7Z4N8 544 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 YIPF7Q8N8F6 280 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 OR52N5Q8NH56 324 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 OR8B4Q96RC9 309 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 TSC22D3Q99576 134 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 COQ7Q99807 217 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 DCUN1D5Q9BTE7 237 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 CDADC1Q9BWV3 514 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 SLC25A18Q9H1K4 315 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 BCO1Q9HAY6 547 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 GP6Q9HCN6 339 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 ACOXLQ9NUZ1 547 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 PARPBPQ9NWS1 579 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 ING1Q9UK53 422 aaPredicted RBP12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 SF3B6Q9Y3B4 125 aaKnown RBP12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 UGT2A1Q9Y4X1 527 aa12.24□□□□□ -0.45
PDLIM5-203ENST00000359265 MED12LQ86YW9 2145 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 OR14I1A6ND48 311 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 OR6C65A6NJZ3 312 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 PRR32B1ATL7 298 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 E9PI62 339 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 MAGEB4O15481 346 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 OGG1O15527 345 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 PLPP2O43688 288 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 MRPL33O75394 65 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 GPX5O75715 221 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 ABHD16AO95870 558 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 MSR1P21757 451 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 EDNRAP25101 427 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 TGM4P49221 684 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 KLRB1Q12918 225 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 CDK5R1Q15078 307 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 KRTCAP3Q53RY4 240 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 PHYHD1Q5SRE7 291 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 RIPPLY2Q5TAB7 128 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 OTPQ5XKR4 325 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 DMKNQ6E0U4 476 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 RPL22L1Q6P5R6 122 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 USP43Q70EL4 1123 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 LINC00346Q8IVM7 164 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 OR2AJ1Q8NGZ0 328 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 ZNF775Q96BV0 537 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 ABHD6Q9BV23 337 aa12.23□□□□□ -0.45
PDLIM5-203ENST00000359265 NELFAQ9H3P2 528 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms