RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 TMEM38AQ9H6F2 299 aa16.83■□□□□ 0.29
SHANK1-202ENST00000359082 CSAG2Q9Y5P2 127 aa16.83■□□□□ 0.29
SHANK1-202ENST00000359082 KIF13AQ9H1H9 1805 aa16.83■□□□□ 0.28
SHANK1-202ENST00000359082 TMEM235A6NFC5 223 aa16.83■□□□□ 0.28
SHANK1-202ENST00000359082 SLCO2B1O94956 709 aa16.83■□□□□ 0.28
SHANK1-202ENST00000359082 NPPBP16860 134 aa16.83■□□□□ 0.28
SHANK1-202ENST00000359082 DUSP1P28562 367 aa16.83■□□□□ 0.28
SHANK1-202ENST00000359082 KIAA1024LP59773 190 aa16.83■□□□□ 0.28
SHANK1-202ENST00000359082 SLC35B4Q969S0 331 aa16.83■□□□□ 0.28
SHANK1-202ENST00000359082 ZBP1Q9H171 429 aa16.83■□□□□ 0.28
SHANK1-202ENST00000359082 ZNF331Q9NQX6 463 aaPredicted RBP16.83■□□□□ 0.28
SHANK1-202ENST00000359082 SYT5O00445 386 aa16.83■□□□□ 0.28
SHANK1-202ENST00000359082 YKT6O15498 198 aa16.83■□□□□ 0.28
SHANK1-202ENST00000359082 DFFBO76075 338 aa16.83■□□□□ 0.28
SHANK1-202ENST00000359082 MT-ATP6P00846 226 aa16.83■□□□□ 0.28
SHANK1-202ENST00000359082 LIPAP38571 399 aa16.83■□□□□ 0.28
SHANK1-202ENST00000359082 OR6K3Q8NGY3 331 aa16.83■□□□□ 0.28
SHANK1-202ENST00000359082 UBE2FQ969M7 185 aa16.83■□□□□ 0.28
SHANK1-202ENST00000359082 TEX37Q96LM6 180 aa16.83■□□□□ 0.28
SHANK1-202ENST00000359082 STACQ99469 402 aa16.83■□□□□ 0.28
SHANK1-202ENST00000359082 CHST11Q9NPF2 352 aa16.83■□□□□ 0.28
SHANK1-202ENST00000359082 TRMT12Q53H54 448 aaKnown RBP16.83■□□□□ 0.28
SHANK1-202ENST00000359082 BCORP1Q8N888 145 aa16.83■□□□□ 0.28
SHANK1-202ENST00000359082 CSF3RQ99062 836 aa16.83■□□□□ 0.28
SHANK1-202ENST00000359082 EGLN1Q9GZT9 426 aa16.83■□□□□ 0.28
SHANK1-202ENST00000359082 SLCO5A1Q9H2Y9 848 aa16.83■□□□□ 0.28
SHANK1-202ENST00000359082 UBQLN3Q9H347 655 aa16.83■□□□□ 0.28
SHANK1-202ENST00000359082 PLPP1O14494 284 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 YIF1AO95070 293 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 DUSP5Q16690 384 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 LRRC26Q2I0M4 334 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 PRSS35Q8N3Z0 413 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 OR52N1Q8NH53 320 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 NUDT8Q8WV74 236 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 NXPE3Q969Y0 559 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 C14orf79Q96F83 325 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 CLCF1Q9UBD9 225 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 MPPED2Q15777 294 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 RNF151Q2KHN1 245 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 CORO6Q6QEF8 472 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 GRINAQ7Z429 371 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 SAGE1Q9NXZ1 904 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 ICMTO60725 284 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 PIPP12273 146 aaPredicted RBP16.82■□□□□ 0.28
SHANK1-202ENST00000359082 EN2P19622 333 aaPredicted RBP16.82■□□□□ 0.28
SHANK1-202ENST00000359082 APOBEC1P41238 236 aaKnown RBP16.82■□□□□ 0.28
SHANK1-202ENST00000359082 HSF1Q00613 529 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 TIMD4Q96H15 378 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 ZNF2Q9BSG1 426 aaPredicted RBP16.82■□□□□ 0.28
SHANK1-202ENST00000359082 MFRPQ9BY79 579 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 AK3Q9UIJ7 227 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 OR2A25A4D2G3 310 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 OR5H15A6NDH6 313 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 BTBD17A6NE02 478 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 OR5H14A6NHG9 310 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 OR5H1A6NKK0 313 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 KIAA1456Q9P272 454 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 EXO1Q9UQ84 846 aaKnown RBP16.82■□□□□ 0.28
SHANK1-202ENST00000359082 GLAP06280 429 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 QDPRP09417 244 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 PCSK6P29122 969 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 CSN1S1P47710 185 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 WDR88Q6ZMY6 472 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 WFDC5Q8TCV5 224 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 MS4A4AQ96JQ5 239 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 BTF3L4Q96K17 158 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 BCO1Q9HAY6 547 aa16.82■□□□□ 0.28
SHANK1-202ENST00000359082 SSSCA1O60232 199 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 SLC2A10O95528 541 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 RHOUQ7L0Q8 258 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 LYSMD2Q8IV50 215 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 OR51F2Q8NH61 342 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 ZNF576Q9H609 170 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 LGALS8O00214 317 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 IHHQ14623 411 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 ADAMTSL3P82987 1691 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 M0R082 166 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 CST5P28325 142 aaPredicted RBP16.81■□□□□ 0.28
SHANK1-202ENST00000359082 C1orf87Q8N0U7 546 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 NANOGP1Q8N7R0 232 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 TMEM99Q8N816 258 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 SCARB1Q8WTV0 552 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 RNF167Q9H6Y7 350 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 CHST2Q9Y4C5 530 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 HS3ST3A1Q9Y663 406 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 PDGFAP04085 211 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 TGM1P22735 817 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 NKX2-1P43699 371 aaPredicted RBP16.81■□□□□ 0.28
SHANK1-202ENST00000359082 PARM1Q6UWI2 310 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 C11orf40Q8WZ69 217 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 PINX1Q96BK5 328 aaKnown RBP16.81■□□□□ 0.28
SHANK1-202ENST00000359082 P2RY12Q9H244 342 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 CTSFQ9UBX1 484 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 IGHV3-15A0A0B4J1V0 119 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 FABP1P07148 127 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 RPS19P39019 145 aaKnown RBP16.81■□□□□ 0.28
SHANK1-202ENST00000359082 RFX2P48378 723 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 TPMTP51580 245 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 HAGHQ16775 308 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 TOR2AQ5JU69 321 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms