RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 H3F3CQ6NXT2 135 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 LPCAT3Q6P1A2 487 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 RELL2Q8NC24 303 aaPredicted RBP12.51□□□□□ -0.41
VCP-201ENST00000358901 FAM174AQ8TBP5 190 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 CCNL2Q96S94 520 aaPredicted RBP12.51□□□□□ -0.41
VCP-201ENST00000358901 OR14J1Q9UGF5 321 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 TRAPPC4Q9Y296 219 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 STMND1H3BQB6 276 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 F10P00742 488 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 ALOX5APP20292 161 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 NKAIN1Q4KMZ8 207 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 C10orf111Q8N326 155 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 SUMF1Q8NBK3 374 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 OR2G2Q8NGZ5 317 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 SMIM4Q8WVI0 70 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 NUDCD2Q8WVJ2 157 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 MRGPRX1Q96LB2 322 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 LRFN5Q96NI6 719 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 SIGLEC11Q96RL6 698 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 TEX101Q9BY14 249 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 PARP12Q9H0J9 701 aaKnown RBP12.51□□□□□ -0.41
VCP-201ENST00000358901 TMEM100Q9NV29 134 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 TMEM184BQ9Y519 407 aaPredicted RBP12.51□□□□□ -0.41
VCP-201ENST00000358901 SVILO95425 2214 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 GPR171O14626 319 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 DSCR3O14972 297 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 PHF1O43189 567 aaPredicted RBP12.51□□□□□ -0.41
VCP-201ENST00000358901 HYAL3O43820 417 aaPredicted RBP12.51□□□□□ -0.41
VCP-201ENST00000358901 SCO1O75880 301 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 CBX7O95931 251 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 GCH1P30793 250 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 UBE2KP61086 200 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 MRPS34P82930 218 aaKnown RBP12.51□□□□□ -0.41
VCP-201ENST00000358901 RAB31Q13636 194 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 TMEM196Q5HYL7 178 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 GJC3Q8NFK1 279 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 OR5M1Q8NGP8 315 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 OR51E1Q8TCB6 317 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 MALSU1Q96EH3 234 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 SLC19A3Q9BZV2 496 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 SCPEP1Q9HB40 452 aa12.51□□□□□ -0.41
VCP-201ENST00000358901 EXO1Q9UQ84 846 aaKnown RBP12.51□□□□□ -0.41
VCP-201ENST00000358901 PRAMEF25A6NGN4 478 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 SSX4O60224 188 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 ABHD16AO95870 558 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 EIF1P41567 113 aaKnown RBP12.5□□□□□ -0.41
VCP-201ENST00000358901 HSF1Q00613 529 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 DOC2BQ14184 412 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 RNF165Q6ZSG1 346 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 TMEM200AQ86VY9 491 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 OR4N2Q8NGD1 307 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 RBMXL1Q96E39 390 aaKnown RBP12.5□□□□□ -0.41
VCP-201ENST00000358901 LRRC46Q96FV0 321 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 MED29Q9NX70 200 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 ANKRD10Q9NXR5 420 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 TMEM221A6NGB7 291 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 GMDSO60547 372 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 ALOX12BO75342 701 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 TAGLNQ01995 201 aaKnown RBP12.5□□□□□ -0.41
VCP-201ENST00000358901 C8orf82Q6P1X6 216 aaPredicted RBP12.5□□□□□ -0.41
VCP-201ENST00000358901 PLPP5Q8NEB5 264 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 OR2AK2Q8NG84 335 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 APH1BQ8WW43 257 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 TMED6Q8WW62 240 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 FKRPQ9H9S5 495 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 ATP6V1G2-DDX39BF2Z307 99 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 EIF1BO60739 113 aaKnown RBP12.5□□□□□ -0.41
VCP-201ENST00000358901 LILRB5O75023 590 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 IGHA2P01877 340 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 PI3P19957 117 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 SSR4P51571 173 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 EPHA4P54764 986 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 CDK5Q00535 292 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 AADACL3Q5VUY0 350 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 ZNF813Q6ZN06 617 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 FJX1Q86VR8 437 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 PRSS35Q8N3Z0 413 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 TMEM217Q8N7C4 229 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 TAS2R5Q9NYW4 299 aa12.5□□□□□ -0.41
VCP-201ENST00000358901 OR5H14A6NHG9 310 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 CEBPZOSA8MTT3 80 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 SERPINA7P05543 415 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 IRF2P14316 349 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 CBR1P16152 277 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 CD27P26842 260 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 EMC4Q5J8M3 183 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 TMEM215Q68D42 235 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 TCTE3Q8IZS6 198 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 CNEP1R1Q8N9A8 125 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 OR5L1Q8NGL2 311 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 UCN3Q969E3 161 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 BOKQ9UMX3 212 aaPredicted RBP12.49□□□□□ -0.41
VCP-201ENST00000358901 SDCBPO00560 298 aaPredicted RBP12.49□□□□□ -0.41
VCP-201ENST00000358901 ICOSLGO75144 302 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 PTHLHP12272 177 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 ATF1P18846 271 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 SNTB1Q13884 538 aaKnown RBP12.49□□□□□ -0.41
VCP-201ENST00000358901 ABHD5Q8WTS1 349 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 ELSPBP1Q96BH3 223 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 SLAMF6Q96DU3 332 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms