RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 PRH1P02810 166 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 GUCA1AP43080 201 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-203ENST00000358528 BAMBIQ13145 260 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 DHRS2Q13268 280 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 CD226Q15762 336 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 PDSS1Q5T2R2 415 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 PAPD4Q6PIY7 484 aaKnown RBP5.95□□□□□ -1.46
CSDE1-203ENST00000358528 CHRDL2Q6WN34 429 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 MAMDC2Q7Z304 686 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-203ENST00000358528 OR2W3Q7Z3T1 314 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 PEG10Q86TG7 708 aaKnown RBP5.95□□□□□ -1.46
CSDE1-203ENST00000358528 CMIPQ8IY22 773 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 CLRN3Q8NCR9 226 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 OR13H1Q8NG92 308 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 GPR119Q8TDV5 335 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 RLN3Q8WXF3 142 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 EMC6Q9BV81 110 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 DHCR7Q9UBM7 475 aaKnown RBP5.95□□□□□ -1.46
CSDE1-203ENST00000358528 HHLA2Q9UM44 414 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 PCDHB10Q9UN67 800 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 BRWD1Q9NSI6 2320 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 FRMPD3Q5JV73 1810 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 TMEM272A0A1B0GTI8 110 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 STK17BO94768 372 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 CPN1P15169 458 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 NME2P22392 152 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 VEGFBP49765 207 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 NPY4RP50391 375 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 PMPCAQ10713 525 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 SMCO1Q147U7 214 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 ACKR1Q16570 336 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 ALG11Q2TAA5 492 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 TMEM196Q5HYL7 178 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 OR6N1Q8NGY5 312 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 BAHD1Q8TBE0 780 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-203ENST00000358528 NT5CQ8TCD5 201 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 ARL11Q969Q4 196 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 CNTNAP3BQ96NU0 1288 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 LMF2Q9BU23 707 aaKnown RBP5.95□□□□□ -1.46
CSDE1-203ENST00000358528 NXF5Q9H1B4 397 aaKnown RBP5.95□□□□□ -1.46
CSDE1-203ENST00000358528 ZNF701Q9NV72 531 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-203ENST00000358528 FREM3P0C091 2139 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 RFPL4AA6NLU0 287 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 OR4C45A6NMZ5 311 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 RFPL4AL1F8VTS6 287 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 SYT7O43581 403 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 SLC6A9P48067 706 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 ZNF74Q16587 644 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 KRBOX4Q5JUW0 171 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 NKAPLQ5M9Q1 402 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 ANKRD16Q6P6B7 361 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 NPSR1Q6W5P4 371 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 FJX1Q86VR8 437 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 SVBPQ8N300 66 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 ESX1Q8N693 406 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 OR1J4Q8NGS1 313 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 OR1S1Q8NH92 325 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 MAFIPQ8WZ33 124 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 ANKRD9Q96BM1 317 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-203ENST00000358528 TSPAN32Q96QS1 320 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 ZNF587Q96SQ5 575 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-203ENST00000358528 C12orf57Q99622 126 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 JAM3Q9BX67 310 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 DNTTIP1Q9H147 329 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 BANF2Q9H503 90 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 COPS7AQ9UBW8 275 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 SERTAD3Q9UJW9 196 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 CSAG2Q9Y5P2 127 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 CYR61O00622 381 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 B3GALNT1O75752 331 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 LDOC1O95751 146 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-203ENST00000358528 WNT11O96014 354 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 ERCC1P07992 297 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-203ENST00000358528 THEGLP0DJG4 465 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 GLI4P10075 376 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 MGMTP16455 207 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 GNB3P16520 340 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 CNR1P21554 472 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 BDKRB2P30411 391 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 NSDHLQ15738 373 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 SLC22A6Q4U2R8 563 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 EXOSC6Q5RKV6 272 aaKnown RBP5.94□□□□□ -1.46
CSDE1-203ENST00000358528 SLC29A4Q7RTT9 530 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 DCXRQ7Z4W1 244 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 TMEM200AQ86VY9 491 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 MARCH1Q8TCQ1 289 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 ELP5Q8TE02 316 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 LMX1AQ8TE12 382 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 TAAR8Q969N4 342 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 C4orf45Q96LM5 186 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 ZNF578Q96N58 590 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-203ENST00000358528 NPAS1Q99742 590 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 MMP25Q9NPA2 562 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 ATPIF1Q9UII2 106 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 FAM96BQ9Y3D0 163 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 TEX13DA0A0J9YY54 714 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-203ENST00000358528 SDCBPO00560 298 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-203ENST00000358528 SERPINA5P05154 406 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 GAAP10253 952 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 AMY2BP19961 511 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms