RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 AKAP12Q02952 1782 aa8.98□□□□□ -0.97
CHD3-202ENST00000358181 NEURL1O76050 574 aa8.98□□□□□ -0.97
CHD3-202ENST00000358181 UTS2O95399 124 aa8.98□□□□□ -0.97
CHD3-202ENST00000358181 BMP5P22003 454 aa8.98□□□□□ -0.97
CHD3-202ENST00000358181 PROZP22891 400 aa8.98□□□□□ -0.97
CHD3-202ENST00000358181 HAGHQ16775 308 aa8.98□□□□□ -0.97
CHD3-202ENST00000358181 METTL11BQ5VVY1 283 aa8.98□□□□□ -0.97
CHD3-202ENST00000358181 ENTHD1Q8IYW4 607 aa8.98□□□□□ -0.97
CHD3-202ENST00000358181 CDRT4Q8N9R6 151 aa8.98□□□□□ -0.97
CHD3-202ENST00000358181 ZFP62Q8NB50 900 aaPredicted RBP8.98□□□□□ -0.97
CHD3-202ENST00000358181 OR2G2Q8NGZ5 317 aa8.98□□□□□ -0.97
CHD3-202ENST00000358181 FGF13Q92913 245 aa8.98□□□□□ -0.97
CHD3-202ENST00000358181 SLC45A3Q96JT2 553 aa8.98□□□□□ -0.97
CHD3-202ENST00000358181 ZIC5Q96T25 663 aa8.98□□□□□ -0.97
CHD3-202ENST00000358181 DEFB108AA8MXU0 73 aa8.98□□□□□ -0.97
CHD3-202ENST00000358181 TMEM262E9PQX1 116 aa8.98□□□□□ -0.97
CHD3-202ENST00000358181 M0QYG6 137 aa8.98□□□□□ -0.97
CHD3-202ENST00000358181 RD3LP0DJH9 198 aa8.98□□□□□ -0.97
CHD3-202ENST00000358181 MYF5P13349 255 aa8.98□□□□□ -0.97
CHD3-202ENST00000358181 SPINT3P49223 89 aa8.98□□□□□ -0.97
CHD3-202ENST00000358181 CTBSQ01459 385 aa8.98□□□□□ -0.97
CHD3-202ENST00000358181 Q3ZCU0 254 aa8.98□□□□□ -0.97
CHD3-202ENST00000358181 TMEM181Q9P2C4 612 aa8.98□□□□□ -0.97
CHD3-202ENST00000358181 DNAJB6O75190 326 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 IGHV3-13P01766 116 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 IGHV3-7P01780 117 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 OPRK1P41145 380 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 ZNF181Q2M3W8 571 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 WDR5BQ86VZ2 330 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 OR10R2Q8NGX6 335 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 SLC35A4Q96G79 324 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 R3HDMLQ9H3Y0 253 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 WNT5AP41221 380 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 SPINK9Q5DT21 86 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 RGS7BPQ6MZT1 257 aaPredicted RBP8.97□□□□□ -0.97
CHD3-202ENST00000358181 FAM174AQ8TBP5 190 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 NXF2Q9GZY0 626 aaKnown RBP8.97□□□□□ -0.97
CHD3-202ENST00000358181 CD320Q9NPF0 282 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 FBXO8Q9NRD0 319 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 TMEM140Q9NV12 185 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 KNDC1Q76NI1 1749 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 DOT1LQ8TEK3 1739 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 GALR3O60755 368 aaPredicted RBP8.97□□□□□ -0.97
CHD3-202ENST00000358181 MITFO75030 526 aaPredicted RBP8.97□□□□□ -0.97
CHD3-202ENST00000358181 JRKO75564 520 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 NPY4RP50391 375 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 ETV1P50549 477 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 ZNF140P52738 457 aaPredicted RBP8.97□□□□□ -0.97
CHD3-202ENST00000358181 SUMO1P63165 101 aaKnown RBP8.97□□□□□ -0.97
CHD3-202ENST00000358181 NHLH1Q02575 133 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 NHLH2Q02577 135 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 RIPPLY1Q0D2K3 151 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 SYT6Q5T7P8 510 aaPredicted RBP8.97□□□□□ -0.97
CHD3-202ENST00000358181 ANKRD13BQ86YJ7 626 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 ACOT4Q8N9L9 421 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 RPEQ96AT9 228 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 C8orf44Q96CB5 159 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 PLEKHF2Q9H8W4 249 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 MYH7BA7E2Y1 1941 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 OR2F2O95006 317 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 OR8G3PP0DMU2 310 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 AKR1C3P42330 323 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 VEZF1Q14119 521 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 TFAP2EQ6VUC0 442 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 TMEM123Q8N131 208 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 OR2AK2Q8NG84 335 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 OR52B6Q8NGF0 335 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 ATP5SQ99766 215 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 SLC2A11Q9BYW1 496 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 ADAM29Q9UKF5 820 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 TMED7-TICAM2A0A0A6YYA0 188 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 RHBDL1O75783 438 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 COX6B1P14854 86 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 RAB5AP20339 215 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 Q6ZPB1 254 aaPredicted RBP8.97□□□□□ -0.97
CHD3-202ENST00000358181 OR4K5Q8NGD3 323 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 SLCO4A1Q96BD0 722 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 SGK494Q96LW2 274 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 CDCA3Q99618 268 aaPredicted RBP8.97□□□□□ -0.97
CHD3-202ENST00000358181 THAP7Q9BT49 309 aaPredicted RBP8.97□□□□□ -0.97
CHD3-202ENST00000358181 PELI2Q9HAT8 420 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 PRDM7Q9NQW5 492 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 FAM53CQ9NYF3 392 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 TAS2R5Q9NYW4 299 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 TMED7Q9Y3B3 224 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 F2RL2O00254 374 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 PTGESO14684 152 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 ZNF750Q32MQ0 723 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 EPGNQ6UW88 154 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 ZNF841Q6ZN19 808 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 FCRLAQ7L513 359 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 ZFPM2Q8WW38 1151 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 GRAMD2BQ96HH9 432 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 ABHD14AQ9BUJ0 271 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 LOXL2Q9Y4K0 774 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 NAV1Q8NEY1 1877 aa8.97□□□□□ -0.97
CHD3-202ENST00000358181 NME2P1O60361 137 aa8.96□□□□□ -0.97
CHD3-202ENST00000358181 TBX19O60806 448 aa8.96□□□□□ -0.97
CHD3-202ENST00000358181 GYPAP02724 150 aa8.96□□□□□ -0.97
CHD3-202ENST00000358181 C21orf33P30042 268 aaPredicted RBP8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms