RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 DND1Q8IYX4 353 aaKnown RBP12.83□□□□□ -0.36
NIPAL3-203ENST00000358028 FAM109AQ8N4B1 249 aa12.83□□□□□ -0.36
NIPAL3-203ENST00000358028 OR2G2Q8NGZ5 317 aa12.83□□□□□ -0.36
NIPAL3-203ENST00000358028 OR52I2Q8NH67 350 aa12.83□□□□□ -0.36
NIPAL3-203ENST00000358028 SYNPRQ8TBG9 265 aa12.83□□□□□ -0.36
NIPAL3-203ENST00000358028 GPR148Q8TDV2 347 aa12.83□□□□□ -0.36
NIPAL3-203ENST00000358028 THEM6Q8WUY1 208 aa12.83□□□□□ -0.36
NIPAL3-203ENST00000358028 ASB17Q8WXJ9 295 aa12.83□□□□□ -0.36
NIPAL3-203ENST00000358028 MED30Q96HR3 178 aa12.83□□□□□ -0.36
NIPAL3-203ENST00000358028 TXNIPQ9H3M7 391 aa12.83□□□□□ -0.36
NIPAL3-203ENST00000358028 VSX1Q9NZR4 365 aaPredicted RBP12.83□□□□□ -0.36
NIPAL3-203ENST00000358028 FOXJ2Q9P0K8 574 aa12.83□□□□□ -0.36
NIPAL3-203ENST00000358028 SCP2D1Q9UJQ7 156 aa12.83□□□□□ -0.36
NIPAL3-203ENST00000358028 MGAT4AQ9UM21 535 aa12.83□□□□□ -0.36
NIPAL3-203ENST00000358028 B9D1Q9UPM9 204 aa12.83□□□□□ -0.36
NIPAL3-203ENST00000358028 RCE1Q9Y256 329 aa12.83□□□□□ -0.36
NIPAL3-203ENST00000358028 ANKRD20A5PA0PJZ0 165 aa12.82□□□□□ -0.36
NIPAL3-203ENST00000358028 PRSS37A4D1T9 235 aa12.82□□□□□ -0.36
NIPAL3-203ENST00000358028 ANKUB1A6NFN9 424 aa12.82□□□□□ -0.36
NIPAL3-203ENST00000358028 ERVH48-1M5A8F1 160 aa12.82□□□□□ -0.36
NIPAL3-203ENST00000358028 PLPP3O14495 311 aa12.82□□□□□ -0.36
NIPAL3-203ENST00000358028 SCRG1O75711 98 aa12.82□□□□□ -0.36
NIPAL3-203ENST00000358028 SNAPC5O75971 98 aa12.82□□□□□ -0.36
NIPAL3-203ENST00000358028 OR6A2O95222 327 aa12.82□□□□□ -0.36
NIPAL3-203ENST00000358028 TPOP07202 933 aa12.82□□□□□ -0.36
NIPAL3-203ENST00000358028 FBXW4P57775 412 aa12.82□□□□□ -0.36
NIPAL3-203ENST00000358028 SNRPD2P62316 118 aaKnown RBP12.82□□□□□ -0.36
NIPAL3-203ENST00000358028 DNM1P46Q6ZS02 220 aa12.82□□□□□ -0.36
NIPAL3-203ENST00000358028 ZNF227Q86WZ6 799 aa12.82□□□□□ -0.36
NIPAL3-203ENST00000358028 OTOSQ8NHW6 89 aa12.82□□□□□ -0.36
NIPAL3-203ENST00000358028 NUBPLQ8TB37 319 aa12.82□□□□□ -0.36
NIPAL3-203ENST00000358028 TMEM234Q8WY98 164 aa12.82□□□□□ -0.36
NIPAL3-203ENST00000358028 MESP1Q9BRJ9 268 aa12.82□□□□□ -0.36
NIPAL3-203ENST00000358028 UTP23Q9BRU9 249 aaKnown RBP12.82□□□□□ -0.36
NIPAL3-203ENST00000358028 OR11A1Q9GZK7 315 aa12.82□□□□□ -0.36
NIPAL3-203ENST00000358028 SLC39A1Q9NY26 324 aa12.82□□□□□ -0.36
NIPAL3-203ENST00000358028 RALYQ9UKM9 306 aaKnown RBP12.82□□□□□ -0.36
NIPAL3-203ENST00000358028 RARRES3Q9UL19 164 aa12.82□□□□□ -0.36
NIPAL3-203ENST00000358028 B3GALT1Q9Y5Z6 326 aa12.82□□□□□ -0.36
NIPAL3-203ENST00000358028 A0A1B0GTH9 108 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 TTLL8A6PVC2 850 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 B4E171 279 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 SSNA1O43805 119 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 ZNF354AO60765 605 aaPredicted RBP12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 KHDRBS3O75525 346 aaKnown RBP12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 TSPAN7P41732 249 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 RPS27P42677 84 aaKnown RBP12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 MC2RQ01718 297 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 ZBTB37Q5TC79 503 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 LRRC69Q6ZNQ3 347 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 ZNF676Q8N7Q3 588 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 OR11G2Q8NGC1 345 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 OR6S1Q8NH40 331 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 ST8SIA1Q92185 356 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 DCBLD2Q96PD2 775 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 ZNF587Q96SQ5 575 aaPredicted RBP12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 AMELYQ99218 206 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 KCNG2Q9UJ96 466 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 ELF5Q9UKW6 265 aaPredicted RBP12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 PPIEQ9UNP9 301 aaKnown RBP12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 PCNX3Q9H6A9 2034 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 IGSF10Q6WRI0 2623 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 IGLV1-36A0A0B4J1U3 117 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 TRBV11-1A0A0K0K1C0 115 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 ANXA2P2A6NMY6 339 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 OR2T1O43869 369 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 ANXA2P07355 339 aaKnown RBP12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 ADRA2CP18825 462 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 SOX2P48431 317 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 SUMO3P55854 103 aaPredicted RBP12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 PER3P56645 1201 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 DCDP81605 110 aaKnown RBP12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 C17orf67Q0P5P2 114 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 C1QTNF12Q5T7M4 302 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 PAPD4Q6PIY7 484 aaKnown RBP12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 SEZ6L2Q6UXD5 910 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 THAP3Q8WTV1 239 aaPredicted RBP12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 C4orf45Q96LM5 186 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 OR8B4Q96RC9 309 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 TAAR9Q96RI9 348 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 STEAP1Q9UHE8 339 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 SLC23A1Q9UHI7 598 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 ING1Q9UK53 422 aaPredicted RBP12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 RAXQ9Y2V3 346 aa12.81□□□□□ -0.36
NIPAL3-203ENST00000358028 CACNA1GO43497 2377 aa12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 SLC22A23A1A5C7 686 aa12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 C2orf72A6NCS6 295 aa12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 FTCDNL1E5RQL4 147 aa12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 SLC16A7O60669 478 aa12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 GLSO94925 669 aaPredicted RBP12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 HLA-DQA2P01906 255 aa12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 CXCL3P19876 107 aa12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 CDK2P24941 298 aa12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 KIR3DL2P43630 455 aa12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 MECP2P51608 486 aaKnown RBP12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 EMP2P54851 167 aa12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 TAS2R20P59543 309 aa12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 CAMK2DQ13557 499 aa12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 OR5M10Q6IEU7 315 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms